CHRM3-AS2 Gene

Name CHRM3 antisense RNA 2
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n CHRM3‐AS2 is a long non‐coding RNA that has recently emerged as a noteworthy regulator in cancer. In ovarian carcinoma, CHRM3‐AS2 was identified as part of a five–lncRNA immune‐associated signature with independent prognostic value. Its differential expression correlates with immune cell infiltration and the activation of pathways such as hedgehog, Wnt signaling, cytokine receptor interaction, antigen processing, and T cell receptor signaling, suggesting a role in modulating the tumor–immune microenvironment."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n In glioma, CHRM3‐AS2 is up‐regulated and predominantly localized in the cytoplasm. Functional studies indicate that silencing CHRM3‐AS2 impairs cell viability, colony formation, migration, and invasion while promoting apoptosis. Mechanistically, CHRM3‐AS2 acts via the miR‐370-5p/KLF4 axis, where its suppression disrupts this regulatory cascade and contributes to the inhibition of malignant progression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Collectively, these findings suggest that CHRM3‐AS2 may serve as both a prognostic biomarker and a potential therapeutic target in cancers where it modulates tumor progression and the immune response.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Yan Li, Fan-Fan Huo, Ying-Ying Wen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Screening and Identification of an Immune-Associated lncRNA Prognostic Signature in Ovarian Carcinoma: Evidence from Bioinformatic Analysis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biomed Res Int (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1155/2021/6680036"}], "href": "https://doi.org/10.1155/2021/6680036"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33997040"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33997040"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Dong Wang, Qiang Chen, Jun Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Silencing of lncRNA CHRM3-AS2 Expression Exerts Anti-Tumour Effects Against Glioma "}, {"type": "a", "children": [{"type": "t", "text": "i"}], "href": "i"}, {"type": "t", "text": "via"}, {"type": "a", "children": [{"type": "t", "text": "/i"}], "href": "/i"}, {"type": "t", "text": " Targeting microRNA-370-5p/KLF4."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Front Oncol (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3389/fonc.2022.856381"}], "href": "https://doi.org/10.3389/fonc.2022.856381"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35359381"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35359381"}]}]}]}
NCBI Gene ID 100506915
API
Download Associations
Predicted Functions View CHRM3-AS2's ARCHS4 Predicted Functions.
Co-expressed Genes View CHRM3-AS2's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View CHRM3-AS2's ARCHS4 Predicted Functions.

Functional Associations

CHRM3-AS2 has 764 functional associations with biological entities spanning 4 categories (organism, disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA) extracted from 10 datasets.

Click the + buttons to view associations for CHRM3-AS2 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CellMarker Gene-Cell Type Associations cell types associated with CHRM3-AS2 gene from the CellMarker Gene-Cell Type Associations dataset.
GEO Signatures of Differentially Expressed Genes for Diseases disease perturbations changing expression of CHRM3-AS2 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of CHRM3-AS2 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Kinase Perturbations kinase perturbations changing expression of CHRM3-AS2 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Viral Infections virus perturbations changing expression of CHRM3-AS2 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of CHRM3-AS2 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of CHRM3-AS2 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
GTEx Tissue-Specific Aging Signatures tissue samples with high or low expression of CHRM3-AS2 gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset.
HuBMAP Azimuth Cell Type Annotations cell types associated with CHRM3-AS2 gene from the HuBMAP Azimuth Cell Type Annotations dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of CHRM3-AS2 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.