| Name | ciliary microtubule associated protein 1A |
| Description | ODF3 is a component of sperm flagella outer dense fibers, which add stiffness, elastic recoil, and protection against shearing forces during sperm movement.[supplied by OMIM, Apr 2004] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nCD93 is emerging as a multifunctional regulator of innate immunity. Studies in CD93‐deficient mice have shown that, although traditional in vitro phagocytic assays may appear largely unaltered, the in vivo clearance of apoptotic cells is impaired. This defect appears to be linked to dysregulated complement activation and abnormalities in leukocyte recruitment. Moreover, proteolytic shedding of membrane‐bound CD93—as well as the appearance of a soluble form—has been correlated with modulation of inflammatory processes and efficient engulfment of dying cells during tissue injury and immune challenge."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "6"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn addition to its role in innate responses, CD93 is critically involved in lymphohematopoiesis and B‐cell lineage maturation. Re‐expression of CD93 during plasma‐cell differentiation is essential for the maintenance of antibody secretion and the survival of long‐lived bone marrow plasma cells. Furthermore, early lymphohematopoietic progenitors that display CD93 (also known as AA4.1 in mice) demonstrate a bias toward lymphoid potential, and genetic polymorphisms in CD93 appear to influence early B‐cell developmental stages as well as susceptibility to autoimmune disorders."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "7", "end_ref": "9"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nCD93 also plays a key role in vascular biology. In endothelial cells, it regulates integrin signaling and fibronectin fibrillogenesis—processes that are essential for vessel maturation, stabilization of cell–cell junctions, and angiogenic sprouting. In tumor models, the CD93–multimerin-2 interaction has been shown to guide the formation of endothelial filopodia and thereby supports proper vessel organization. Moreover, CD93 interaction with other endothelial regulators, including IGFBP7 and VEGFR2, ensures vascular integrity, limits aberrant permeability, and even modulates platelet function. These multifaceted actions establish CD93 as not only an angiogenic factor but also a guardian of the endothelial barrier in both physiological and pathological settings."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "10", "end_ref": "16"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nRecent insights have uncovered a role for CD93 in neural development. In the cerebral cortex, CD93 expressed by neural stem cells and neurons negatively regulates astrogenesis. Through interactions with extracellular matrix components such as multimerin-2 and subsequent modulation of β-catenin signaling, CD93 represses premature astrocyte differentiation; loss of this control leads to an increase in glial formation and has been associated with autism-like behavioral phenotypes in knockout models."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "17"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nFinally, CD93 participates in metabolic regulation. In animal models of diet-induced metabolic stress, deficiency in CD93 has been linked to impaired glucose tolerance, reduced insulin sensitivity, and structural alterations in pancreatic islets. These findings suggest that, beyond its vascular and immune roles, CD93 may be an important mediator in maintaining glucometabolic homeostasis under conditions of nutritional stress."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "18"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Peter J Norsworthy, Liliane Fossati-Jimack, Josefina Cortes-Hernandez, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Murine CD93 (C1qRp) contributes to the removal of apoptotic cells in vivo but is not required for C1q-mediated enhancement of phagocytosis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Immunol (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.4049/jimmunol.172.6.3406"}], "href": "https://doi.org/10.4049/jimmunol.172.6.3406"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15004139"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15004139"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Mallary C Greenlee, Sarah A Sullivan, Suzanne Slater Bohlson "}, {"type": "b", "children": [{"type": "t", "text": "Detection and characterization of soluble CD93 released during inflammation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Inflamm Res (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s00011-009-0064-0"}], "href": "https://doi.org/10.1007/s00011-009-0064-0"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19603257"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19603257"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Mallary C Greenlee-Wacker, Manuel D Galvan, Suzanne S Bohlson "}, {"type": "b", "children": [{"type": "t", "text": "CD93: recent advances and implications in disease."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Curr Drug Targets (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.2174/138945012799424651"}], "href": "https://doi.org/10.2174/138945012799424651"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22206251"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22206251"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Denise Harhausen, Vincent Prinz, Gina Ziegler, et al. "}, {"type": "b", "children": [{"type": "t", "text": "CD93/AA4.1: a novel regulator of inflammation in murine focal cerebral ischemia."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Immunol (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.4049/jimmunol.0902342"}], "href": "https://doi.org/10.4049/jimmunol.0902342"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20439917"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20439917"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Mark R Griffiths, Marina Botto, Bryan Paul Morgan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "CD93 regulates central nervous system inflammation in two mouse models of autoimmune encephalomyelitis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Immunology (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/imm.12974"}], "href": "https://doi.org/10.1111/imm.12974"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29923617"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29923617"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Mallary C Greenlee-Wacker, Carlos Briseño, Manuel Galvan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Membrane-associated CD93 regulates leukocyte migration and C1q-hemolytic activity during murine peritonitis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Immunol (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.4049/jimmunol.1100803"}], "href": "https://doi.org/10.4049/jimmunol.1100803"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21849679"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21849679"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Stéphane Chevrier, Céline Genton, Axel Kallies, et al. "}, {"type": "b", "children": [{"type": "t", "text": "CD93 is required for maintenance of antibody secretion and persistence of plasma cells in the bone marrow niche."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.0809736106"}], "href": "https://doi.org/10.1073/pnas.0809736106"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19228948"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19228948"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Toshiyuki Yamane, Naoki Hosen, Hidetoshi Yamazaki, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Expression of AA4.1 marks lymphohematopoietic progenitors in early mouse development."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.0904090106"}], "href": "https://doi.org/10.1073/pnas.0904090106"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19458045"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19458045"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Ghazal Zekavat, Raha Mozaffari, Vanessa J Arias, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A novel CD93 polymorphism in non-obese diabetic (NOD) and NZB/W F1 mice is linked to a CD4+ iNKT cell deficient state."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Immunogenetics (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s00251-010-0442-3"}], "href": "https://doi.org/10.1007/s00251-010-0442-3"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20387063"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20387063"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Roberta Lugano, Kalyani Vemuri, Di Yu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "CD93 promotes β1 integrin activation and fibronectin fibrillogenesis during tumor angiogenesis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Clin Invest (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1172/JCI97459"}], "href": "https://doi.org/10.1172/JCI97459"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29763414"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29763414"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Yuan-Chung Kao, Shinn-Jong Jiang, Wen-An Pan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The epidermal growth factor-like domain of CD93 is a potent angiogenic factor."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0051647"}], "href": "https://doi.org/10.1371/journal.pone.0051647"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23272129"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23272129"}]}, {"type": "r", "ref": 12, "children": [{"type": "t", "text": "Roberta Lugano, Kalyani Vemuri, Stefano Barbera, et al. "}, {"type": "b", "children": [{"type": "t", "text": "CD93 maintains endothelial barrier function by limiting the phosphorylation and turnover of VE-cadherin."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "FASEB J (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1096/fj.202201623RR"}], "href": "https://doi.org/10.1096/fj.202201623RR"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "36961390"}], "href": "https://pubmed.ncbi.nlm.nih.gov/36961390"}]}, {"type": "r", "ref": 13, "children": [{"type": "t", "text": "Yueming Xu, Yi Sun, Yuwen Zhu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Structural insight into CD93 recognition by IGFBP7."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Structure (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.str.2023.12.011"}], "href": "https://doi.org/10.1016/j.str.2023.12.011"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "38218180"}], "href": "https://pubmed.ncbi.nlm.nih.gov/38218180"}]}, {"type": "r", "ref": 14, "children": [{"type": "t", "text": "Kalyani Vemuri, Beatriz de Alves Pereira, Patricia Fuenzalida, et al. "}, {"type": "b", "children": [{"type": "t", "text": "CD93 maintains endothelial barrier function and limits metastatic dissemination."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "JCI Insight (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1172/jci.insight.169830"}], "href": "https://doi.org/10.1172/jci.insight.169830"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "38441970"}], "href": "https://pubmed.ncbi.nlm.nih.gov/38441970"}]}, {"type": "r", "ref": 15, "children": [{"type": "t", "text": "Hye Jung Park, Eun-Yi Oh, Yoon Hee Park, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Potential of serum soluble CD93 as a biomarker for asthma in an ovalbumin-induced asthma murine model."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biomarkers (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1080/1354750X.2018.1443510"}], "href": "https://doi.org/10.1080/1354750X.2018.1443510"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29498549"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29498549"}]}, {"type": "r", "ref": 16, "children": [{"type": "t", "text": "Silvia Maria Grazia Trivigno, Mauro Vismara, Ilaria Canobbio, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The C-Type Lectin Receptor CD93 Regulates Platelet Activation and Surface Expression of the Protease Activated Receptor 4."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Thromb Haemost (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1055/a-2166-5841"}], "href": "https://doi.org/10.1055/a-2166-5841"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "37669782"}], "href": "https://pubmed.ncbi.nlm.nih.gov/37669782"}]}, {"type": "r", "ref": 17, "children": [{"type": "t", "text": "Qingli Liang, Libo Su, Dongming Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "CD93 negatively regulates astrogenesis in response to MMRN2 through the transcriptional repressor ZFP503 in the developing brain."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.1922713117"}], "href": "https://doi.org/10.1073/pnas.1922713117"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32291340"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32291340"}]}, {"type": "r", "ref": 18, "children": [{"type": "t", "text": "Rona J Strawbridge, Agneta Hilding, Angela Silveira, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Soluble CD93 Is Involved in Metabolic Dysregulation but Does Not Influence Carotid Intima-Media Thickness."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Diabetes (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.2337/db15-1333"}], "href": "https://doi.org/10.2337/db15-1333"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27659228"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27659228"}]}]}]}
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| NCBI Gene ID | 113746 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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CIMAP1A has 503 functional associations with biological entities spanning 5 categories (functional term, phrase or reference, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 14 datasets.
Click the + buttons to view associations for CIMAP1A from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of CIMAP1A gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset. | |
| CM4AI KOLF21J CRISPRi Gene Perturbation Atlas | gene perturbations changing expression of CIMAP1A gene from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas dataset. | |
| COMPARTMENTS Curated Protein Localization Evidence Scores 2025 | cellular components containing CIMAP1A protein from the COMPARTMENTS Curated Protein Localization Evidence Scores 2025 dataset. | |
| COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 | cellular components co-occuring with CIMAP1A protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset. | |
| GO Cellular Component Annotations 2025 | cellular components containing CIMAP1A protein from the curated GO Cellular Component Annotations 2025 dataset. | |
| GWAS Catalog SNP-Phenotype Associations 2025 | phenotypes associated with CIMAP1A gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset. | |
| JASPAR Predicted Human Transcription Factor Targets 2025 | transcription factors regulating expression of CIMAP1A gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset. | |
| JASPAR Predicted Mouse Transcription Factor Targets 2025 | transcription factors regulating expression of CIMAP1A gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset. | |
| Rummagene Transcription Factor Associations 2026 | transcription factors regulating expression of CIMAP1A gene from the Rummagene Transcription Factor Associations 2026 dataset. | |
| RummaGEO Drug Perturbation Signatures | drug perturbations changing expression of CIMAP1A gene from the RummaGEO Drug Perturbation Signatures dataset. | |
| RummaGEO Gene Perturbation Signatures | gene perturbations changing expression of CIMAP1A gene from the RummaGEO Gene Perturbation Signatures dataset. | |
| TISSUES Curated Tissue Protein Expression Evidence Scores 2025 | tissues with high expression of CIMAP1A protein from the TISSUES Curated Tissue Protein Expression Evidence Scores 2025 dataset. | |
| TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 | tissues with high expression of CIMAP1A protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 dataset. | |
| TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 | tissues co-occuring with CIMAP1A protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset. | |