| Name | ciliary microtubule inner protein 2C |
| Description | Predicted to be involved in flagellated sperm motility. Located in axonemal microtubule. [provided by Alliance of Genome Resources, Mar 2025] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nSynaptotagmin IV (Syt IV; also termed Synaptotagmin-4 in some studies) emerges as a critical modulator of Ca²⁺‐dependent exocytosis in the central nervous system. In hippocampal neurons and astrocytes, Syt IV regulates neurotransmitter release and gliotransmission—its expression in astrocytes is essential for calcium‐dependent glutamate exocytosis and proper hippocampus-dependent memory, while its postsynaptic localization also governs the targeted release of neurotrophins like BDNF to scale synaptic strength and control long‐term potentiation. These studies implicate Syt IV as a negative regulator of short-term plasticity and reveal its role in maintaining homeostatic synaptic activity."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "5"}]}, {"type": "t", "text": "\n\n"}]}, {"type": "t", "text": "\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn addition to its roles in conventional synaptic release, Syt IV modulates exocytotic behavior in specialized sensory and neuroendocrine cells. In cochlear inner hair cells, its expression is necessary for establishing a linear dependence of neurotransmitter release on Ca²⁺ influx, contrasting with the higher-order calcium sensitivity mediated by other synaptotagmins. In neuroendocrine and dopaminergic systems, Syt IV influences fusion kinetics, fusion pore properties, and even the spatial aspects of synaptically targeted cargo such as dense-core vesicles, thereby affecting processes such as oxytocin/vasopressin secretion and somatodendritic dopamine release. Complementary ultrastructural studies further suggest that loss of Syt IV perturbs vesicle docking and axonal transport, underscoring its importance for coordinated presynaptic function."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "6", "end_ref": "10"}]}, {"type": "t", "text": "\n\n"}]}, {"type": "t", "text": "\n"}, {"type": "p", "children": [{"type": "t", "text": "\nBeyond its neural and sensory functions, Syt IV (or Syt4) plays pivotal roles in non-neuronal secretory cells. In pancreatic β cells, for instance, a developmental upregulation of Syt4 refines insulin secretion by modulating the readily releasable pool of vesicles, thereby contributing to proper glucose-stimulated insulin secretion and β cell maturation. Similarly, in melanocytes, overexpression of Syt4 facilitates Ca²⁺ influx through the TRPM1 channel, which in turn modulates dendrite extension and melanogenesis via pathways involving ERK, CREB, and key melanogenic regulatory proteins. These findings highlight a broader functional spectrum in which Syt IV/Syt4 governs the calcium sensitivity of vesicle fusion events across diverse cell types."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "11"}]}, {"type": "t", "text": "\n\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Qi Zhang, Mitsunori Fukuda, Elisabeth Van Bockstaele, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Synaptotagmin IV regulates glial glutamate release."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.0401960101"}], "href": "https://doi.org/10.1073/pnas.0401960101"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15197251"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15197251"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Gregory D Ferguson, Harvey R Herschman, Daniel R Storm "}, {"type": "b", "children": [{"type": "t", "text": "Reduced anxiety and depression-like behavior in synaptotagmin IV (-/-) mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Neuropharmacology (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.neuropharm.2004.05.008"}], "href": "https://doi.org/10.1016/j.neuropharm.2004.05.008"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15380377"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15380377"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Gregory D Ferguson, Hongbing Wang, Harvey R Herschman, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Altered hippocampal short-term plasticity and associative memory in synaptotagmin IV (-/-) mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hippocampus (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/hipo.20013"}], "href": "https://doi.org/10.1002/hipo.20013"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15390175"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15390175"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Camin Dean, Huisheng Liu, F Mark Dunning, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Synaptotagmin-IV modulates synaptic function and long-term potentiation by regulating BDNF release."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Neurosci (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/nn.2315"}], "href": "https://doi.org/10.1038/nn.2315"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19448629"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19448629"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Camin Dean, Huisheng Liu, Thorsten Staudt, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Distinct subsets of Syt-IV/BDNF vesicles are sorted to axons versus dendrites and recruited to synapses by activity."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Neurosci (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1523/JNEUROSCI.4515-11.2012"}], "href": "https://doi.org/10.1523/JNEUROSCI.4515-11.2012"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22514304"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22514304"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Stuart L Johnson, Christoph Franz, Stephanie Kuhn, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Synaptotagmin IV determines the linear Ca2+ dependence of vesicle fusion at auditory ribbon synapses."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Neurosci (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/nn.2456"}], "href": "https://doi.org/10.1038/nn.2456"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20010821"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20010821"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Zhenjie Zhang, Akhil Bhalla, Camin Dean, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Synaptotagmin IV: a multifunctional regulator of peptidergic nerve terminals."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Neurosci (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/nn.2252"}], "href": "https://doi.org/10.1038/nn.2252"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19136969"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19136969"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Jose Alfredo Mendez, Marie-Josée Bourque, Caroline Fasano, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Somatodendritic dopamine release requires synaptotagmin 4 and 7 and the participation of voltage-gated calcium channels."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M111.218032"}], "href": "https://doi.org/10.1074/jbc.M111.218032"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21576241"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21576241"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "C P Arthur, C Dean, M Pagratis, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Loss of synaptotagmin IV results in a reduction in synaptic vesicles and a distortion of the Golgi structure in cultured hippocampal neurons."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Neuroscience (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.neuroscience.2010.01.056"}], "href": "https://doi.org/10.1016/j.neuroscience.2010.01.056"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20138128"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20138128"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Paolo Spaiardi, Walter Marcotti, Sergio Masetto, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Synaptotagmin-4 promotes dendrite extension and melanogenesis in alpaca melanocytes by regulating Ca"}, {"type": "a", "children": [{"type": "t", "text": "sup"}], "href": "sup"}, {"type": "t", "text": "2+"}, {"type": "a", "children": [{"type": "t", "text": "/sup"}], "href": "/sup"}, {"type": "t", "text": " influx via TRPM1 channels."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Biochem Funct (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/cbf.3465"}], "href": "https://doi.org/10.1002/cbf.3465"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31743468"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31743468"}]}]}]}
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| NCBI Gene ID | 339778 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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CIMIP2C has 752 functional associations with biological entities spanning 5 categories (functional term, phrase or reference, chemical, cell line, cell type or tissue, gene, protein or microRNA, sequence feature) extracted from 13 datasets.
Click the + buttons to view associations for CIMIP2C from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of CIMIP2C gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset. | |
| CM4AI KOLF21J CRISPRi Gene Perturbation Atlas | gene perturbations changing expression of CIMIP2C gene from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas dataset. | |
| COMPARTMENTS Curated Protein Localization Evidence Scores 2025 | cellular components containing CIMIP2C protein from the COMPARTMENTS Curated Protein Localization Evidence Scores 2025 dataset. | |
| COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 | cellular components co-occuring with CIMIP2C protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset. | |
| GO Cellular Component Annotations 2025 | cellular components containing CIMIP2C protein from the curated GO Cellular Component Annotations 2025 dataset. | |
| GTEx eQTL 2025 | SNPs regulating expression of CIMIP2C gene from the GTEx eQTL 2025 dataset. | |
| JASPAR Predicted Human Transcription Factor Targets 2025 | transcription factors regulating expression of CIMIP2C gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset. | |
| JASPAR Predicted Mouse Transcription Factor Targets 2025 | transcription factors regulating expression of CIMIP2C gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset. | |
| Rummagene Transcription Factor Associations 2026 | transcription factors regulating expression of CIMIP2C gene from the Rummagene Transcription Factor Associations 2026 dataset. | |
| RummaGEO Drug Perturbation Signatures | drug perturbations changing expression of CIMIP2C gene from the RummaGEO Drug Perturbation Signatures dataset. | |
| RummaGEO Gene Perturbation Signatures | gene perturbations changing expression of CIMIP2C gene from the RummaGEO Gene Perturbation Signatures dataset. | |
| TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 | tissues with high expression of CIMIP2C protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 dataset. | |
| TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 | tissues co-occuring with CIMIP2C protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset. | |