| Name | CLDN10 antisense RNA 1 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Recent studies highlight the multifaceted role of the long non‑coding RNA CLDN10‑AS1 in cancer and vascular pathology. In lung adenocarcinoma, CLDN10‑AS1 was identified within a competing endogenous RNA (ceRNA) network and found to be significantly associated with patient prognosis. Functional analyses indicate that the RNAs in this network are enriched for roles in cell migration, transmembrane receptor function, and protein kinase activity, suggesting that CLDN10‑AS1 may influence key oncogenic processes in lung cancer."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n In colorectal cancer, integrative multi‑omics analyses revealed that CLDN10‑AS1 forms part of a copy number variation‐associated signature of long non‑coding RNAs that correlates with poor clinical outcomes, underscoring its potential as a prognostic biomarker in this malignancy."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " Although other studies of colorectal and rectal cancers have delineated lncRNA‑related ceRNA networks to decipher tumor pathogenesis and survival prediction"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": ", the specific contribution of CLDN10‑AS1 appears to extend beyond a mere network component, suggesting an active role in modulating tumor behavior.\n "}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n In addition to its oncological implications, CLDN10‑AS1 is markedly up‑regulated in human endothelial cells following oxidized low‑density lipoprotein stimulation. This pronounced up‑regulation"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": "points toward a potential involvement in the vascular responses underlying endothelial dysfunction and atherogenesis. Finally, while reviews on long non‑coding RNAs in angiogenesis and vascular diseases provide broader context on lncRNA functions in these processes"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": ", the emerging data on CLDN10‑AS1 reinforce its relevance as a biomarker and functional regulator across multiple disease settings.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Donghui Jin, Yuxuan Song, Yuan Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of Three lncRNAs as Potential Predictive Biomarkers of Lung Adenocarcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biomed Res Int (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1155/2020/7573689"}], "href": "https://doi.org/10.1155/2020/7573689"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32149133"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32149133"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Huimin Liu, Xiaoyu Gu, Guihua Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Copy number variations primed lncRNAs deregulation contribute to poor prognosis in colorectal cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Aging (Albany NY) (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.18632/aging.102168"}], "href": "https://doi.org/10.18632/aging.102168"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31442207"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31442207"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Qiaowei Fan, Bingrong Liu "}, {"type": "b", "children": [{"type": "t", "text": "Comprehensive analysis of a long noncoding RNA-associated competing endogenous RNA network in colorectal cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Onco Targets Ther (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.2147/OTT.S158309"}], "href": "https://doi.org/10.2147/OTT.S158309"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29760555"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29760555"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Zhiyuan Zhang, Sen Wang, Dongjian Ji, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Construction of a ceRNA network reveals potential lncRNA biomarkers in rectal adenocarcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncol Rep (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3892/or.2018.6296"}], "href": "https://doi.org/10.3892/or.2018.6296"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29512732"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29512732"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Krishna K Singh, Pratiek N Matkar, Yi Pan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Endothelial long non-coding RNAs regulated by oxidized LDL."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell Biochem (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s11010-017-2984-2"}], "href": "https://doi.org/10.1007/s11010-017-2984-2"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28316063"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28316063"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Bo Yu, Shusheng Wang "}, {"type": "b", "children": [{"type": "t", "text": "Angio-LncRs: LncRNAs that regulate angiogenesis and vascular disease."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Theranostics (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.7150/thno.26024"}], "href": "https://doi.org/10.7150/thno.26024"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30026873"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30026873"}]}]}]}
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| NCBI Gene ID | 100874194 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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CLDN10-AS1 has 182 functional associations with biological entities spanning 3 categories (disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA) extracted from 8 datasets.
Click the + buttons to view associations for CLDN10-AS1 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of CLDN10-AS1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of CLDN10-AS1 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| GEO Signatures of Differentially Expressed Genes for Diseases | disease perturbations changing expression of CLDN10-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of CLDN10-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Kinase Perturbations | kinase perturbations changing expression of CLDN10-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of CLDN10-AS1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of CLDN10-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of CLDN10-AS1 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |