| Name | COL4A2 antisense RNA 1 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Recent studies have implicated the long non‐coding RNA COL4A2‐AS1 in tumor progression and prognosis across different cancer types. In colorectal cancer, COL4A2‐AS1 has been shown to influence key cellular processes including proliferation, colony formation, and apoptosis, with in vitro assays and in vivo xenograft models demonstrating its role in promoting tumorigenesis and progression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " Moreover, in breast cancer, integrative bioinformatics analysis within a competing endogenous RNA (ceRNA) network identified COL4A2‐AS1 as one of several long non‐coding RNAs whose expression is closely correlated with patient prognosis, highlighting its potential as a novel therapeutic target and prognostic biomarker."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Zijun Yu, Yeming Wang, Jianwu Deng, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNA COL4A2-AS1 facilitates cell proliferation and glycolysis of colorectal cancer cells via miR-20b-5p/hypoxia inducible factor 1 alpha subunit axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Bioengineered (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1080/21655979.2021.1969833"}], "href": "https://doi.org/10.1080/21655979.2021.1969833"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34477476"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34477476"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Yan Yao, Tingting Zhang, Lingyu Qi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Integrated analysis of co-expression and ceRNA network identifies five lncRNAs as prognostic markers for breast cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Mol Med (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/jcmm.14721"}], "href": "https://doi.org/10.1111/jcmm.14721"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31613058"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31613058"}]}]}]}
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| NCBI Gene ID | 100874203 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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COL4A2-AS1 has 673 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 8 datasets.
Click the + buttons to view associations for COL4A2-AS1 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq | tissue samples with high or low expression of COL4A2-AS1 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of COL4A2-AS1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of COL4A2-AS1 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of COL4A2-AS1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of COL4A2-AS1 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of COL4A2-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of COL4A2-AS1 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles | cell types and tissues with high or low DNA methylation of COL4A2-AS1 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset. | |