CORO7-PAM16 Gene

Name CORO7-PAM16 readthrough
Description This locus represents naturally occurring read-through transcription between the neighboring CORO7 (coronin 7) and PAM16 (presequence translocase-associated motor 16) genes on chromosome 16. The read-through transcript encodes a fusion protein that shares sequence identity with each individual gene product. [provided by RefSeq, Jan 2011]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Coronin 7 (CORO7) and PAM16 (also known as MAGMAS) are evolutionarily conserved proteins that contribute to distinct yet essential cellular functions. CORO7 is a unique member of the coronin family whose architecture—with dual WD‐repeat domains—differentiates it from other coronins that primarily modulate actin dynamics. Instead, CORO7 localizes predominantly to Golgi membranes where it orchestrates vesicle formation and cargo trafficking. Its recruitment to the Golgi depends on a sequential process involving Src kinase–mediated tyrosine phosphorylation and interactions with adaptor complexes such as AP‐1, thereby facilitating the budding of Golgi‐derived transport carriers and supporting localized actin assembly necessary for transport."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "3"}]}, {"type": "t", "text": " Additionally, CORO7 functions as a scaffold protein within the Hippo signaling pathway by binding core pathway components and modulating protein–protein interactions that are pivotal for cell–cell contact responses and the regulation of organ size."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": " Its involvement in ubiquitin-dependent processes—such as forming part of an SCF-like complex that promotes the degradation of regulatory proteins—further highlights its multifaceted role in intracellular trafficking and signal transduction.\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n In contrast, PAM16 is a mitochondria-associated protein that plays a critical role in the translocation of nuclear-encoded preproteins into the mitochondrial matrix. Expressed in trabecular bone and cartilage during early development, PAM16 is indispensable for normal ossification. Mutations that destabilize PAM16 impair mitochondrial protein import, triggering cell death and leading to severe skeletal dysplasias."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n In summary, while CORO7 is central to the organization of intracellular membrane compartments and the regulation of post-Golgi vesicular trafficking as well as participating in signal transduction pathways like Hippo, PAM16 is essential for mitochondrial protein import and energy homeostasis during development. Together, these studies underscore how evolutionarily conserved proteins achieve cellular specificity by engaging in discrete protein networks that control critical aspects of cellular physiology.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "V Rybakin, R H Rastetter, M Stumpf, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Molecular mechanism underlying the association of Coronin-7 with Golgi membranes."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Mol Life Sci (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s00018-008-8278-9"}], "href": "https://doi.org/10.1007/s00018-008-8278-9"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18581049"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18581049"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Vasily Rybakin, Maria Stumpf, Andrea Schulze, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Coronin 7, the mammalian POD-1 homologue, localizes to the Golgi apparatus."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "FEBS Lett (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.febslet.2004.07.066"}], "href": "https://doi.org/10.1016/j.febslet.2004.07.066"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15327992"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15327992"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Wei-Chien Yuan, Yu-Ru Lee, Shu-Yu Lin, et al. "}, {"type": "b", "children": [{"type": "t", "text": "K33-Linked Polyubiquitination of Coronin 7 by Cul3-KLHL20 Ubiquitin E3 Ligase Regulates Protein Trafficking."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.molcel.2014.03.035"}], "href": "https://doi.org/10.1016/j.molcel.2014.03.035"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24768539"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24768539"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Jina Park, Kyoungho Jun, Yujin Choi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "CORO7 functions as a scaffold protein for the core kinase complex assembly of the Hippo pathway."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.RA120.013297"}], "href": "https://doi.org/10.1074/jbc.RA120.013297"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33162394"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33162394"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Cybel Mehawej, Agnès Delahodde, Laurence Legeai-Mallet, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The impairment of MAGMAS function in human is responsible for a severe skeletal dysplasia."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS Genet (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pgen.1004311"}], "href": "https://doi.org/10.1371/journal.pgen.1004311"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24786642"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24786642"}]}]}]}
Synonyms Coronin-7, CORO7
NCBI Gene ID 100529144
API
Download Associations
Predicted Functions View CORO7-PAM16's ARCHS4 Predicted Functions.
Co-expressed Genes View CORO7-PAM16's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View CORO7-PAM16's ARCHS4 Predicted Functions.

Functional Associations

CORO7-PAM16 has 2,334 functional associations with biological entities spanning 7 categories (molecular profile, functional term, phrase or reference, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA, sequence feature) extracted from 36 datasets.

Click the + buttons to view associations for CORO7-PAM16 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq tissue samples with high or low expression of CORO7-PAM16 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of CORO7-PAM16 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
CellMarker Gene-Cell Type Associations cell types associated with CORO7-PAM16 gene from the CellMarker Gene-Cell Type Associations dataset.
ChEA Transcription Factor Targets 2022 transcription factors binding the promoter of CORO7-PAM16 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets 2022 dataset.
COMPARTMENTS Curated Protein Localization Evidence Scores 2025 cellular components containing CORO7-PAM16 protein from the COMPARTMENTS Curated Protein Localization Evidence Scores 2025 dataset.
COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 cellular components co-occuring with CORO7-PAM16 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset.
DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 diseases co-occuring with CORO7-PAM16 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset.
DisGeNET Gene-Disease Associations diseases associated with CORO7-PAM16 gene in GWAS and other genetic association datasets from the DisGeNET Gene-Disease Associations dataset.
DisGeNET Gene-Phenotype Associations phenotypes associated with CORO7-PAM16 gene in GWAS and other genetic association datasets from the DisGeNET Gene-Phenoptype Associations dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at CORO7-PAM16 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of CORO7-PAM16 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of CORO7-PAM16 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GO Biological Process Annotations 2025 biological processes involving CORO7-PAM16 gene from the curated GO Biological Process Annotations2025 dataset.
GO Cellular Component Annotations 2025 cellular components containing CORO7-PAM16 protein from the curated GO Cellular Component Annotations 2025 dataset.
GO Molecular Function Annotations 2025 molecular functions performed by CORO7-PAM16 gene from the curated GO Molecular Function Annotations 2025 dataset.
GTEx eQTL 2025 SNPs regulating expression of CORO7-PAM16 gene from the GTEx eQTL 2025 dataset.
HPA Tissue Gene Expression Profiles tissues with high or low expression of CORO7-PAM16 gene relative to other tissues from the HPA Tissue Gene Expression Profiles dataset.
HPA Tissue Protein Expression Profiles tissues with high or low expression of CORO7-PAM16 protein relative to other tissues from the HPA Tissue Protein Expression Profiles dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of CORO7-PAM16 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of CORO7-PAM16 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles cell lines with high or low expression of CORO7-PAM16 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles cell lines with CORO7-PAM16 gene mutations from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles dataset.
MGI Mouse Phenotype Associations 2023 phenotypes of transgenic mice caused by CORO7-PAM16 gene mutations from the MGI Mouse Phenotype Associations 2023 dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of CORO7-PAM16 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles drug perturbations changing expression of CORO7-PAM16 gene from the NIBR DRUG-seq U2OS MoA Box dataset.
ProteomicsDB Cell Type and Tissue Protein Expression Profiles cell types and tissues with high or low expression of CORO7-PAM16 protein relative to other cell types and tissues from the ProteomicsDB Cell Type and Tissue Protein Expression Profiles dataset.
Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures gene perturbations changing expression of CORO7-PAM16 gene from the Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures dataset.
Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures gene perturbations changing expression of CORO7-PAM16 gene from the Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures dataset.
Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles cell types and tissues with high or low DNA methylation of CORO7-PAM16 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at CORO7-PAM16 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.
RummaGEO Drug Perturbation Signatures drug perturbations changing expression of CORO7-PAM16 gene from the RummaGEO Drug Perturbation Signatures dataset.
RummaGEO Gene Perturbation Signatures gene perturbations changing expression of CORO7-PAM16 gene from the RummaGEO Gene Perturbation Signatures dataset.
TargetScan Predicted Nonconserved microRNA Targets microRNAs regulating expression of CORO7-PAM16 gene predicted using nonconserved miRNA seed sequences from the TargetScan Predicted Nonconserved microRNA Targets dataset.
TISSUES Curated Tissue Protein Expression Evidence Scores 2025 tissues with high expression of CORO7-PAM16 protein from the TISSUES Curated Tissue Protein Expression Evidence Scores 2025 dataset.
TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 tissues with high expression of CORO7-PAM16 protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 dataset.
TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 tissues co-occuring with CORO7-PAM16 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset.