| Name | |
| Description | Predicted to contribute to cytochrome-c oxidase activity. Involved in respiratory chain complex IV assembly. Located in mitochondrion. Part of mitochondrial membrane and respiratory chain complex IV. Implicated in MELAS syndrome. [provided by Alliance of Genome Resources, Mar 2025] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Cytochrome c oxidase subunit III (COX3) is a mitochondrially encoded core component of complex IV that plays a central role in electron transport and ATP production. Several lines of evidence now indicate that COX3 function is regulated at multiple levels. Mitochondrial signaling pathways can influence its transcript levels because activation of a mitochondrial NF‐κB pathway leads to phosphorylation and degradation of IκBα and consequently to reduced expression of the COX3 mRNA along with other mitochondrial transcripts."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " Proper post‐transcriptional processing of the COX3 transcript also is critical; for example, a nuclear‐encoded mitochondrial poly(A) polymerase ensures that COX3 mRNAs receive correct polyadenylation, a process that influences mRNA stability even though shortened poly(A) tails may not dramatically destabilize the transcript."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n Furthermore, studies on cytochrome c oxidase assembly demonstrate that COX3, together with other mtDNA‐encoded subunits, is assembled through discrete intermediates. Analysis of patient fibroblasts with mutations in key assembly factors revealed that COX3 is incorporated as part of a subassembly module that eventually associates with nuclear‐encoded subunits to form the mature enzyme."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": " This modular assembly process was further delineated using an MT‑CO3 mutant cybrid cell line that enabled the identification of novel assembly chaperones facilitating proper complex IV assembly."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n In addition, defects in mitochondrial translation can adversely affect COX3 production. In models of mitochondrial disease, errors in translation fidelity have been linked to misincorporation of amino acids in the COX3 polypeptide, thereby contributing to defective respiratory chain function."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": " Alterations in COX3 expression have even been associated with metabolic adaptations in cancer; for instance, increased COX3 mRNA levels have been observed in chemoresistant acute myelogenous leukemia blasts."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n Finally, evolutionary and regulatory studies underscore that COX3, although encoded by the mitochondrial genome, is subject to tight regulation by nuclear factors that modulate the efficiency and control of oxidative phosphorylation. These findings emphasize the pivotal role of COX3 in coordinating the integration of mitochondrial and nuclear signals to maintain cellular energy homeostasis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n In summary, COX3 not only contributes structurally to the cytochrome c oxidase complex but also is dynamically regulated at the transcriptional, post‐transcriptional, translational, and assembly levels to ensure optimal mitochondrial respiratory function.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Patricia C Cogswell, David F Kashatus, Jayne A Keifer, et al. "}, {"type": "b", "children": [{"type": "t", "text": "NF-kappa B and I kappa B alpha are found in the mitochondria. Evidence for regulation of mitochondrial gene expression by NF-kappa B."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2003)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M209995200"}], "href": "https://doi.org/10.1074/jbc.M209995200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12433922"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12433922"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Rafal Tomecki, Aleksandra Dmochowska, Kamil Gewartowski, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of a novel human nuclear-encoded mitochondrial poly(A) polymerase."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nucleic Acids Res (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/nar/gkh923"}], "href": "https://doi.org/10.1093/nar/gkh923"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15547249"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15547249"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Siôn L Williams, Isabelle Valnot, Pierre Rustin, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Cytochrome c oxidase subassemblies in fibroblast cultures from patients carrying mutations in COX10, SCO1, or SURF1."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M309232200"}], "href": "https://doi.org/10.1074/jbc.M309232200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "14607829"}], "href": "https://pubmed.ncbi.nlm.nih.gov/14607829"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Sara Vidoni, Michael E Harbour, Sergio Guerrero-Castillo, et al. "}, {"type": "b", "children": [{"type": "t", "text": "MR-1S Interacts with PET100 and PET117 in Module-Based Assembly of Human Cytochrome c Oxidase."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Rep (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.celrep.2017.01.044"}], "href": "https://doi.org/10.1016/j.celrep.2017.01.044"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28199844"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28199844"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Florin Sasarman, Hana Antonicka, Eric A Shoubridge "}, {"type": "b", "children": [{"type": "t", "text": "The A3243G tRNALeu(UUR) MELAS mutation causes amino acid misincorporation and a combined respiratory chain assembly defect partially suppressed by overexpression of EFTu and EFG2."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Mol Genet (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/hmg/ddn265"}], "href": "https://doi.org/10.1093/hmg/ddn265"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18753147"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18753147"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Tien-sheng Huang, Line M Myklebust, Endre Kjarland, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LEDGF/p75 has increased expression in blasts from chemotherapy-resistant human acute myelogenic leukemia patients and protects leukemia cells from apoptosis in vitro."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cancer (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/1476-4598-6-31"}], "href": "https://doi.org/10.1186/1476-4598-6-31"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17451600"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17451600"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Denis Pierron, Derek E Wildman, Maik Hüttemann, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Cytochrome c oxidase: evolution of control via nuclear subunit addition."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochim Biophys Acta (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbabio.2011.07.007"}], "href": "https://doi.org/10.1016/j.bbabio.2011.07.007"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21802404"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21802404"}]}]}]}
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| NCBI Gene ID | 4514 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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COX3 has 884 functional associations with biological entities spanning 7 categories (organism, functional term, phrase or reference, chemical, disease, phenotype or trait, structural feature, cell line, cell type or tissue, gene, protein or microRNA) extracted from 30 datasets.
Click the + buttons to view associations for COX3 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Biocarta Pathways | pathways involving COX3 protein from the Biocarta Pathways dataset. | |
| CTD Gene-Chemical Interactions | chemicals interacting with COX3 gene/protein from the curated CTD Gene-Chemical Interactions dataset. | |
| CTD Gene-Disease Associations | diseases associated with COX3 gene/protein from the curated CTD Gene-Disease Associations dataset. | |
| DGIdb Drug Targets 2026 | interacting drugs for COX3 protein from the DGIdb Drug Targets 2026 dataset. | |
| DisGeNET Gene-Disease Associations | diseases associated with COX3 gene in GWAS and other genetic association datasets from the DisGeNET Gene-Disease Associations dataset. | |
| DisGeNET Gene-Phenotype Associations | phenotypes associated with COX3 gene in GWAS and other genetic association datasets from the DisGeNET Gene-Phenoptype Associations dataset. | |
| ESCAPE Omics Signatures of Genes and Proteins for Stem Cells | PubMedIDs of publications reporting gene signatures containing COX3 from the ESCAPE Omics Signatures of Genes and Proteins for Stem Cells dataset. | |
| GAD Gene-Disease Associations | diseases associated with COX3 gene in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset. | |
| GeneRIF Biological Term Annotations | biological terms co-occuring with COX3 gene in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of COX3 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Kinase Perturbations | kinase perturbations changing expression of COX3 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of COX3 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GEO Signatures of Differentially Expressed Genes for Viral Infections | virus perturbations changing expression of COX3 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset. | |
| GO Biological Process Annotations 2015 | biological processes involving COX3 gene from the curated GO Biological Process Annotations 2015 dataset. | |
| GO Cellular Component Annotations 2015 | cellular components containing COX3 protein from the curated GO Cellular Component Annotations 2015 dataset. | |
| GO Molecular Function Annotations 2015 | molecular functions performed by COX3 gene from the curated GO Molecular Function Annotations 2015 dataset. | |
| HPA Tissue Protein Expression Profiles | tissues with high or low expression of COX3 protein relative to other tissues from the HPA Tissue Protein Expression Profiles dataset. | |
| HPO Gene-Disease Associations | phenotypes associated with COX3 gene by mapping known disease genes to disease phenotypes from the HPO Gene-Disease Associations dataset. | |
| HuGE Navigator Gene-Phenotype Associations | phenotypes associated with COX3 gene by text-mining GWAS publications from the HuGE Navigator Gene-Phenotype Associations dataset. | |
| InterPro Predicted Protein Domain Annotations | protein domains predicted for COX3 protein from the InterPro Predicted Protein Domain Annotations dataset. | |
| KEGG Pathways | pathways involving COX3 protein from the KEGG Pathways dataset. | |
| LOCATE Predicted Protein Localization Annotations | cellular components predicted to contain COX3 protein from the LOCATE Predicted Protein Localization Annotations dataset. | |
| MiRTarBase microRNA Targets | microRNAs targeting COX3 gene in low- or high-throughput microRNA targeting studies from the MiRTarBase microRNA Targets dataset. | |
| PFOCR Pathway Figure Associations 2023 | pathways involving COX3 protein from the PFOCR Pathway Figure Associations 2023 dataset. | |
| PFOCR Pathway Figure Associations 2024 | pathways involving COX3 protein from the Wikipathways PFOCR 2024 dataset. | |
| Rummagene Transcription Factor Associations 2026 | transcription factors regulating expression of COX3 gene from the Rummagene Transcription Factor Associations 2026 dataset. | |
| Virus MINT Protein-Viral Protein Interactions | interacting viral proteins for COX3 from the Virus MINT Protein-Viral Protein Interactions dataset. | |
| Virus MINT Protein-Virus Interactions | viruses interacting with COX3 from the Virus MINT Protein-Virus Interactions dataset. | |
| WikiPathways Pathways 2014 | pathways involving COX3 protein from the Wikipathways Pathways 2014 dataset. | |
| WikiPathways Pathways 2024 | pathways involving COX3 protein from the WikiPathways Pathways 2024 dataset. | |