CRACD Gene

Name capping protein inhibiting regulator of actin dynamics
Description Involved in negative regulation of barbed-end actin filament capping. Predicted to be located in cytosol. [provided by Alliance of Genome Resources, Mar 2025]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n CRACD, also known as KIAA1211 or CRAD, is a protein implicated in regulating actin dynamics and, by extension, mechanotransduction within cells. In colorectal cancer, reduced CRACD expression has been linked to enhanced tumor cell softening, deregulated epithelial–mesenchymal transition, and increased stemness and metastatic potential through alterations in the subcellular localization of key factors (e.g. YAP), which in turn leads to deregulation of stemness markers such as NANOG and OCT4."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n In contrast, in non‐small cell lung cancer CRACD/KIAA1211 is significantly overexpressed relative to normal tissue, and its inhibition via shRNA reduces cell proliferation and promotes apoptosis, thereby suppressing tumor progression in both in vitro and xenograft models."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n Consistent with its involvement in oncogenesis, CRACD is also found to be upregulated in invasive ductal carcinoma of the breast, suggesting a contributory role in tumor development or progression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n Beyond human cancers, genetic studies in chickens have identified single nucleotide polymorphisms in the KIAA1211 gene that correlate with abdominal fat deposition traits, pointing to broader roles in tissue growth and cellular differentiation."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n In summary, CRACD appears to function in a context‐dependent manner: while its downregulation in colorectal cancer promotes tumor stemness and metastasis through altered mechanical signaling, its overexpression in non‐small cell lung and breast cancers supports tumor cell proliferation and survival. These findings underscore the multifaceted roles of CRACD in cell structural dynamics and oncogenic processes.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Yuhan Chang, Juan Zhang, Xinying Huo, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Substrate rigidity dictates colorectal tumorigenic cell stemness and metastasis via CRAD-dependent mechanotransduction."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Rep (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.celrep.2022.110390"}], "href": "https://doi.org/10.1016/j.celrep.2022.110390"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35172140"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35172140"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Zhengcheng Liu, Hui Cao, Ye Shi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "KIAA1211 plays an oncogenic role in human non-small cell lung cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cancer (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.7150/jca.35951"}], "href": "https://doi.org/10.7150/jca.35951"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31777604"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31777604"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Yulong Bao, Li Wang, Lin Shi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Transcriptome profiling revealed multiple genes and ECM-receptor interaction pathways that may be associated with breast cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Mol Biol Lett (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s11658-019-0162-0"}], "href": "https://doi.org/10.1186/s11658-019-0162-0"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31182966"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31182966"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Xianwen Wu, Qi Zhang, Songsong Xu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Differential expression of six chicken genes associated with fatness traits in a divergently selected broiler population."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell Probes (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.mcp.2015.12.003"}], "href": "https://doi.org/10.1016/j.mcp.2015.12.003"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26746358"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26746358"}]}]}]}
NCBI Gene ID 57482
API
Download Associations
Predicted Functions View CRACD's ARCHS4 Predicted Functions.
Co-expressed Genes View CRACD's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View CRACD's ARCHS4 Predicted Functions.

Functional Associations

CRACD has 1,639 functional associations with biological entities spanning 6 categories (functional term, phrase or reference, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA, sequence feature) extracted from 29 datasets.

Click the + buttons to view associations for CRACD from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles tissue samples with high or low expression of CRACD gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset.
CCLE Cell Line Proteomics Cell lines associated with CRACD protein from the CCLE Cell Line Proteomics dataset.
CellMarker Gene-Cell Type Associations cell types associated with CRACD gene from the CellMarker Gene-Cell Type Associations dataset.
ChEA Transcription Factor Targets 2022 transcription factors binding the promoter of CRACD gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets 2022 dataset.
CM4AI KOLF21J CRISPRi Gene Perturbation Atlas gene perturbations changing expression of CRACD gene from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas dataset.
CM4AI U2OS Cell Map Protein Localization Assemblies assemblies containing CRACD protein from integrated AP-MS and IF data from the CM4AI U2OS Cell Map Protein Localization Assemblies dataset.
COMPARTMENTS Experimental Protein Localization Evidence Scores 2025 cellular components containing CRACD protein in low- or high-throughput protein localization assays from the COMPARTMENTS Experimental Protein Localization Evidence Scores 2025 dataset.
COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 cellular components co-occuring with CRACD protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset.
DepMap CRISPR Gene Dependency cell lines with fitness changed by CRACD gene knockdown relative to other cell lines from the DepMap CRISPR Gene Dependency dataset.
DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 diseases co-occuring with CRACD gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset.
DisGeNET Gene-Disease Associations diseases associated with CRACD gene in GWAS and other genetic association datasets from the DisGeNET Gene-Disease Associations dataset.
GO Biological Process Annotations 2023 biological processes involving CRACD gene from the curated GO Biological Process Annotations 2023 dataset.
GO Biological Process Annotations 2025 biological processes involving CRACD gene from the curated GO Biological Process Annotations2025 dataset.
GTEx eQTL 2025 SNPs regulating expression of CRACD gene from the GTEx eQTL 2025 dataset.
GTEx Tissue-Specific Aging Signatures tissue samples with high or low expression of CRACD gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset.
GWAS Catalog SNP-Phenotype Associations 2025 phenotypes associated with CRACD gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset.
IMPC Knockout Mouse Phenotypes phenotypes of mice caused by CRACD gene knockout from the IMPC Knockout Mouse Phenotypes dataset.
JASPAR Predicted Human Transcription Factor Targets 2025 transcription factors regulating expression of CRACD gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset.
JASPAR Predicted Mouse Transcription Factor Targets 2025 transcription factors regulating expression of CRACD gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset.
MGI Mouse Phenotype Associations 2023 phenotypes of transgenic mice caused by CRACD gene mutations from the MGI Mouse Phenotype Associations 2023 dataset.
PFOCR Pathway Figure Associations 2023 pathways involving CRACD protein from the PFOCR Pathway Figure Associations 2023 dataset.
Rummagene Transcription Factor Associations 2026 transcription factors regulating expression of CRACD gene from the Rummagene Transcription Factor Associations 2026 dataset.
RummaGEO Drug Perturbation Signatures drug perturbations changing expression of CRACD gene from the RummaGEO Drug Perturbation Signatures dataset.
RummaGEO Gene Perturbation Signatures gene perturbations changing expression of CRACD gene from the RummaGEO Gene Perturbation Signatures dataset.
Sci-Plex Drug Perturbation Signatures drug perturbations changing expression of CRACD gene from the Sci-Plex Drug Perturbation Signatures dataset.
Tahoe Therapeutics Tahoe 100M Perturbation Atlas drug perturbations changing expression of CRACD gene from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.
TISSUES Curated Tissue Protein Expression Evidence Scores 2025 tissues with high expression of CRACD protein from the TISSUES Curated Tissue Protein Expression Evidence Scores 2025 dataset.
TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 tissues with high expression of CRACD protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 dataset.
TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 tissues co-occuring with CRACD protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset.