CSMD2-AS1 Gene

Name CSMD2 antisense RNA 1
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Recent studies have increasingly implicated the long non‐coding RNA CSMD2‑AS1 as a potential oncogenic factor with prognostic significance in cancer. In triple‑negative breast cancer, for example, high expression levels of CSMD2‑AS1 were identified as part of a panel of dysregulated lncRNAs associated with lower overall survival, suggesting that CSMD2‑AS1 may contribute to tumor progression and represent a novel biomarker for poor prognosis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In broader analyses of hematological malignancies, including diffuse large B‑cell lymphoma and other B‑cell tumors, deregulated lncRNAs have been shown to modulate cancer‐related pathways, immune signaling, and gene regulatory networks, although the specific role of CSMD2‑AS1 in these processes has yet to be defined."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " Together, these findings indicate that CSMD2‑AS1 may serve as a critical molecular player whose aberrant expression is linked to adverse clinical outcomes across different cancer types.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Xiao-Xiao Li, Li-Juan Wang, Jie Hou, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of Long Noncoding RNAs as Predictors of Survival in Triple-Negative Breast Cancer Based on Network Analysis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biomed Res Int (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1155/2020/8970340"}], "href": "https://doi.org/10.1155/2020/8970340"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32190687"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32190687"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Jie Sun, Liang Cheng, Hongbo Shi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A potential panel of six-long non-coding RNA signature to improve survival prediction of diffuse large-B-cell lymphoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/srep27842"}], "href": "https://doi.org/10.1038/srep27842"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27292966"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27292966"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Lucia Nobili, Domenica Ronchetti, Elisa Taiana, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNAs in B-cell malignancies: a comprehensive overview."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncotarget (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.18632/oncotarget.17303"}], "href": "https://doi.org/10.18632/oncotarget.17303"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28947998"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28947998"}]}]}]}
NCBI Gene ID 402779
API
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Predicted Functions View CSMD2-AS1's ARCHS4 Predicted Functions.
Co-expressed Genes View CSMD2-AS1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View CSMD2-AS1's ARCHS4 Predicted Functions.

Functional Associations

CSMD2-AS1 has 148 functional associations with biological entities spanning 1 categories (cell line, cell type or tissue) extracted from 2 datasets.

Click the + buttons to view associations for CSMD2-AS1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of CSMD2-AS1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of CSMD2-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.