| Name | chondroitin sulfate proteoglycan 4 pseudogene 1, Y-linked |
| Description | There are two copies of this pseudogene within the P1 palindrome on chromosome Y. This record represents the more telomeric copy. [provided by RefSeq, Jul 2008] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nCurrent advances in synaptic biology have revealed a highly dynamic interplay among presynaptic and postsynaptic adhesion molecules that orchestrate synapse formation, maturation, and plasticity. Numerous studies have detailed how key proteins such as neurexins, neuroligins, cerebellin family members, and other modulators regulate trans‐synaptic signaling and receptor targeting through mechanisms including alternative splicing, proteolytic processing, and regulated membrane trafficking."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "10"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nAdditional investigations have dissected the molecular codes and regulatory circuits—such as activity‐dependent alternative splicing, posttranslational modifications, and precise intracellular transport—that fine‐tune synaptic properties and ensure proper neurotransmission. These studies, employing genetic models, super‐resolution imaging, and biochemical analyses, have advanced our understanding of how synaptic organizers modulate excitatory and inhibitory balance and influence behaviors relevant to neuropsychiatric disorders."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "11", "end_ref": "22"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nDespite the rich mechanistic insights provided by these studies on synaptic organizers, none of the available abstracts address or even reference CSPG4P1Y. In contrast to the well‐characterized roles of proteins like neurexins, neuroligins, Cbln1, and associated partners in synaptic adhesion, receptor regulation, and network connectivity"}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "23", "end_ref": "32"}]}, {"type": "t", "text": ", the functional role of CSPG4P1Y in neural wiring, synaptic assembly, or plasticity has not been elucidated. Its absence from these investigations leaves open the possibility that CSPG4P1Y may either be functionally silent or have a yet‐to‐be‐discovered, subtle modulatory role in the synaptic processes governed by these established molecular networks.\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Davide Comoletti, Robyn Flynn, Lori L Jennings, et al. 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| Synonyms | CSPG4LY, CSPG4LYP1, CSPG4PY1, CSPG4P1 |
| NCBI Gene ID | 114758 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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CSPG4P1Y has 130 functional associations with biological entities spanning 6 categories (molecular profile, organism, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 12 datasets.
Click the + buttons to view associations for CSPG4P1Y from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| ChEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of CSPG4P1Y gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
| ChEA Transcription Factor Targets | transcription factors binding the promoter of CSPG4P1Y gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of CSPG4P1Y gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of CSPG4P1Y gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| GEO Signatures of Differentially Expressed Genes for Diseases | disease perturbations changing expression of CSPG4P1Y gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of CSPG4P1Y gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of CSPG4P1Y gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations | transcription factor perturbations changing expression of CSPG4P1Y gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Viral Infections | virus perturbations changing expression of CSPG4P1Y gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of CSPG4P1Y gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of CSPG4P1Y gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| KnockTF Gene Expression Profiles with Transcription Factor Perturbations | transcription factor perturbations changing expression of CSPG4P1Y gene from the KnockTF Gene Expression Profiles with Transcription Factor Perturbations dataset. | |