CSTPP1 Gene

Name centriolar satellite-associated tubulin polyglutamylase complex regulator 1
Description Enables protein-macromolecule adaptor activity. Involved in regulation of protein complex stability. Is active in centriolar satellite. [provided by Alliance of Genome Resources, Mar 2025]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n CSTPP1 (also known as C11ORF49) is a novel regulator of the tubulin polyglutamylase complex (TPGC) that plays a critical role in coordinating cytoskeletal organization, nuclear morphology, and the disassembly of primary cilia (as described in."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " Mechanistically, CSTPP1 is essential for the proper assembly and stability of the TPGC. By modulating the levels of long-chain polyglutamylation on microtubules, CSTPP1 balances the interaction of microtubule-associated proteins and actin nucleators. When CSTPP1 function is compromised, this balance is disturbed, leading to aberrant microtubule assembly that can penetrate the nucleus and cause defects in nuclear shape. Moreover, disruption of CSTPP1 affects the organization of cytoplasmic actin and interferes with the YAP/TAZ signaling pathway, ultimately impeding efficient cilium disassembly and triggering developmental defects in vivo. Overall, these findings underscore the role of CSTPP1 as a key molecular nexus linking microtubule post-translational modifications with nuclear architecture and ciliogenesis.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Lei Wang, Sharad C Paudyal, Yuchen Kang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Regulators of tubulin polyglutamylation control nuclear shape and cilium disassembly by balancing microtubule and actin assembly."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Res (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41422-021-00584-9"}], "href": "https://doi.org/10.1038/s41422-021-00584-9"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34782749"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34782749"}]}]}]}
NCBI Gene ID 79096
API
Download Associations
Predicted Functions View CSTPP1's ARCHS4 Predicted Functions.
Co-expressed Genes View CSTPP1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View CSTPP1's ARCHS4 Predicted Functions.

Functional Associations

CSTPP1 has 2,550 functional associations with biological entities spanning 6 categories (chemical, functional term, phrase or reference, disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA, sequence feature) extracted from 18 datasets.

Click the + buttons to view associations for CSTPP1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles tissue samples with high or low expression of CSTPP1 gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset.
Carcinogenome Chemical Perturbation Carcinogenicity Signatures small molecule perturbations changing expression of CSTPP1 gene from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.
CM4AI KOLF21J CRISPRi Gene Perturbation Atlas gene perturbations changing expression of CSTPP1 gene from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas dataset.
CM4AI U2OS Cell Map Protein Localization Assemblies assemblies containing CSTPP1 protein from integrated AP-MS and IF data from the CM4AI U2OS Cell Map Protein Localization Assemblies dataset.
GTEx eQTL 2025 SNPs regulating expression of CSTPP1 gene from the GTEx eQTL 2025 dataset.
GTEx Tissue Gene Expression Profiles 2023 tissues with high or low expression of CSTPP1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset.
GWAS Catalog SNP-Phenotype Associations 2025 phenotypes associated with CSTPP1 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset.
JASPAR Predicted Human Transcription Factor Targets 2025 transcription factors regulating expression of CSTPP1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset.
JASPAR Predicted Mouse Transcription Factor Targets 2025 transcription factors regulating expression of CSTPP1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset.
LINCS L1000 CMAP Chemical Perturbation Consensus Signatures small molecule perturbations changing expression of CSTPP1 gene from the LINCS L1000 CMAP Chemical Perturbations Consensus Signatures dataset.
Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures gene perturbations changing expression of CSTPP1 gene from the Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures dataset.
Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures gene perturbations changing expression of CSTPP1 gene from the Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures dataset.
Replogle et al., Cell, 2022 RPE1 Essential Perturb-seq Gene Perturbation Signatures gene perturbations changing expression of CSTPP1 gene from the Replogle et al., Cell, 2022 RPE1 Essential Perturb-seq Gene Perturbation Signatures dataset.
Rummagene Transcription Factor Associations 2026 transcription factors regulating expression of CSTPP1 gene from the Rummagene Transcription Factor Associations 2026 dataset.
RummaGEO Drug Perturbation Signatures drug perturbations changing expression of CSTPP1 gene from the RummaGEO Drug Perturbation Signatures dataset.
RummaGEO Gene Perturbation Signatures gene perturbations changing expression of CSTPP1 gene from the RummaGEO Gene Perturbation Signatures dataset.
Sci-Plex Drug Perturbation Signatures drug perturbations changing expression of CSTPP1 gene from the Sci-Plex Drug Perturbation Signatures dataset.
Tahoe Therapeutics Tahoe 100M Perturbation Atlas drug perturbations changing expression of CSTPP1 gene from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.