| Name | CTBP1 antisense RNA 2 (head to head) |
| Description | Involved in postreplication repair and recombinational repair. Located in nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n CTBP1‐AS2 is a multifunctional long noncoding RNA whose dysregulation has been implicated in diverse disease settings. In metabolic disorders, altered CTBP1‐AS2 expression has been associated with diabetes. For instance, in diabetic nephropathy models, overexpression of CTBP1‐AS2 attenuates high glucose–induced proliferation, oxidative stress, extracellular matrix deposition, and inflammatory responses via modulation of the miR‐155‐5p/FOXO1 signaling axis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In addition, reduced levels of CTBP1‐AS2 in peripheral blood cells have been linked with type 2 diabetes susceptibility, indicating its potential as a predictive biomarker."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n In the context of musculoskeletal disorders, CTBP1‐AS2 is upregulated in osteoarthritis, where it appears to suppress chondrocyte proliferation by promoting methylation‐mediated downregulation of miR‑130a."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n In cancers, CTBP1‐AS2 mainly acts as an oncogenic regulator through its activity as a competing endogenous RNA that sponges distinct microRNAs. In hepatocellular carcinoma, it sequesters miR‑195‑5p to relieve inhibition of CEP55 expression, thereby facilitating tumor progression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": " Similarly, in glioma its upregulation promotes epithelial–mesenchymal transition (EMT) and cell migration via a regulatory circuit involving miR‑370‑3p and Wnt7a."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": " CTBP1‐AS2 is also elevated in breast cancer tissues, where its diagnostic performance appears promising."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": " In pancreatic carcinoma, CTBP1‐AS2 enhances proliferation, migration, invasion, and chemoresistance by sponging miR‑141‑3p to upregulate USP22 expression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": " In non‐small cell lung cancer, overexpression of CTBP1‐AS2 promotes cell growth, cell cycle progression, and EMT by suppressing miR‑623 and thereby increasing MMP3 expression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "8"}]}, {"type": "t", "text": " Moreover, in cervical cancer, CTBP1‐AS2 acts as a molecular sponge for miR‑3163 to elevate ZNF217 levels, which in turn enhances tumor proliferation, migration, and invasion"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "9"}]}, {"type": "t", "text": ", and in gastric cancer its high expression is associated with increased cell proliferation and metastasis through regulation of miR‑139‑3p–mediated pathways."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "10"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Beyond cancer, CTBP1‐AS2 is involved in cardiovascular pathologies. In cardiomyocyte hypertrophy, for example, CTBP1‐AS2 is upregulated under stress conditions and promotes hypertrophy by stabilizing TLR4 mRNA through FUS recruitment."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "11"}]}, {"type": "t", "text": " In atherosclerosis, its expression in vascular smooth muscle cells is linked to inhibition of proliferation and promotion of autophagy via a miR‑195‑5p/ATG14 regulatory axis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "12"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Collectively, these findings highlight CTBP1‐AS2 as a pivotal regulator that, predominantly by acting as a microRNA sponge, contributes to the modulation of key signaling pathways involved in cell proliferation, differentiation, inflammation, and apoptosis across a variety of disease contexts. Its diverse roles underscore its potential not only as a diagnostic biomarker but also as a promising therapeutic target.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Guang Wang, Bing Wu, Bo Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA CTBP1-AS2 alleviates high glucose-induced oxidative stress, ECM accumulation, and inflammation in diabetic nephropathy via miR-155-5p/FOXO1 axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Biophys Res Commun (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbrc.2020.08.073"}], "href": "https://doi.org/10.1016/j.bbrc.2020.08.073"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32868076"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32868076"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Maryam Erfanian Omidvar, Hamid Ghaedi, Faranak Kazerouni, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Clinical significance of long noncoding RNA VIM-AS1 and CTBP1-AS2 expression in type 2 diabetes."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Biochem (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jcb.28206"}], "href": "https://doi.org/10.1002/jcb.28206"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30506719"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30506719"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Hongfei Zhang, Jinglian Li, Weiguang Shao, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA CTBP1-AS2 is upregulated in osteoarthritis and increases the methylation of miR-130a gene to inhibit chondrocyte proliferation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Clin Rheumatol (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s10067-020-05113-4"}], "href": "https://doi.org/10.1007/s10067-020-05113-4"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32388751"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32388751"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Li-Xia Liu, Bin Liu, Jie Yu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "SP1-induced upregulation of lncRNA CTBP1-AS2 accelerates the hepatocellular carcinoma tumorigenesis through targeting CEP55 via sponging miR-195-5p."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Biophys Res Commun (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbrc.2020.09.080"}], "href": "https://doi.org/10.1016/j.bbrc.2020.09.080"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32988587"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32988587"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Yongfeng Li, Jin Zong, Cong Zhao "}, {"type": "b", "children": [{"type": "t", "text": "lncRNA CTBP1-AS2 promotes proliferation and migration of glioma by modulating miR-370-3p-Wnt7a-mediated epithelial-mesenchymal transition."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Cell Biol (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1139/bcb-2020-0065"}], "href": "https://doi.org/10.1139/bcb-2020-0065"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33150795"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33150795"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Mehdi Mohebi, Ali Sattari, Soudeh Ghafouri-Fard, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Expression profiling revealed up-regulation of three lncRNAs in breast cancer samples."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Exp Mol Pathol (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.yexmp.2020.104544"}], "href": "https://doi.org/10.1016/j.yexmp.2020.104544"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32976818"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32976818"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Mingliang Zhang, Songbo Ma, Xuzhao Li, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long non‑coding RNA CTBP1‑AS2 upregulates USP22 to promote pancreatic carcinoma progression by sponging miR‑141‑3p."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Med Rep (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3892/mmr.2022.12602"}], "href": "https://doi.org/10.3892/mmr.2022.12602"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35039872"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35039872"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Guanying Yang, Chunjie Zhang "}, {"type": "b", "children": [{"type": "t", "text": "CTBP1-AS2 promoted non-small cell lung cancer progression via sponging the miR-623/MMP3 axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Environ Sci Pollut Res Int (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s11356-021-15921-z"}], "href": "https://doi.org/10.1007/s11356-021-15921-z"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35076836"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35076836"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Shanshan Yang, Feng Shi, Yuting Du, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNA CTBP1-AS2 enhances cervical cancer progression via up-regulation of ZNF217 through sponging miR-3163."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Cell Int (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s12935-020-01430-5"}], "href": "https://doi.org/10.1186/s12935-020-01430-5"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32742190"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32742190"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Yudan Yang, Ming Gao, Yunpeng Li, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA CTBP1-AS2 Facilitates Gastric Cancer Progression via Regulating the miR-139-3p/MMP11 Axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Onco Targets Ther (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.2147/OTT.S264394"}], "href": "https://doi.org/10.2147/OTT.S264394"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33204108"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33204108"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Xiaojia Luo, Sen He, Yongmei Hu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Sp1-induced LncRNA CTBP1-AS2 is a novel regulator in cardiomyocyte hypertrophy by interacting with FUS to stabilize TLR4."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cardiovasc Pathol (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.carpath.2019.04.005"}], "href": "https://doi.org/10.1016/j.carpath.2019.04.005"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31220774"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31220774"}]}, {"type": "r", "ref": 12, "children": [{"type": "t", "text": "Yang Wang, Cheng-Xin Zhang, Sheng-Lin Ge, et al. "}, {"type": "b", "children": [{"type": "t", "text": "CTBP1‑AS2 inhibits proliferation and induces autophagy in ox‑LDL‑stimulated vascular smooth muscle cells by regulating miR‑195‑5p/ATG14."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Int J Mol Med (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3892/ijmm.2020.4624"}], "href": "https://doi.org/10.3892/ijmm.2020.4624"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32626936"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32626936"}]}]}]}
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| Synonyms | CTBP1-DT, CTBP1-AS1, C4ORF42 |
| NCBI Gene ID | 92070 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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CTBP1-AS2 has 2,102 functional associations with biological entities spanning 6 categories (molecular profile, chemical, disease, phenotype or trait, functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 25 datasets.
Click the + buttons to view associations for CTBP1-AS2 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of CTBP1-AS2 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset. | |
| Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray | tissue samples with high or low expression of CTBP1-AS2 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray dataset. | |
| Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of CTBP1-AS2 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of CTBP1-AS2 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| CCLE Cell Line Gene Expression Profiles | cell lines with high or low expression of CTBP1-AS2 gene relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset. | |
| ChEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of CTBP1-AS2 gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
| ChEA Transcription Factor Targets | transcription factors binding the promoter of CTBP1-AS2 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
| CTD Gene-Chemical Interactions | chemicals interacting with CTBP1-AS2 gene/protein from the curated CTD Gene-Chemical Interactions dataset. | |
| CTD Gene-Disease Associations | diseases associated with CTBP1-AS2 gene/protein from the curated CTD Gene-Disease Associations dataset. | |
| DISEASES Experimental Gene-Disease Association Evidence Scores | diseases associated with CTBP1-AS2 gene in GWAS datasets from the DISEASES Experimental Gene-Disease Assocation Evidence Scores dataset. | |
| DISEASES Text-mining Gene-Disease Association Evidence Scores | diseases co-occuring with CTBP1-AS2 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at CTBP1-AS2 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of CTBP1-AS2 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of CTBP1-AS2 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of CTBP1-AS2 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of CTBP1-AS2 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations | transcription factor perturbations changing expression of CTBP1-AS2 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of CTBP1-AS2 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of CTBP1-AS2 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of CTBP1-AS2 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles | cell lines with high or low expression of CTBP1-AS2 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset. | |
| LOCATE Predicted Protein Localization Annotations | cellular components predicted to contain CTBP1-AS2 protein from the LOCATE Predicted Protein Localization Annotations dataset. | |
| Roadmap Epigenomics Cell and Tissue Gene Expression Profiles | cell types and tissues with high or low expression of CTBP1-AS2 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue Gene Expression Profiles dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at CTBP1-AS2 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |
| TCGA Signatures of Differentially Expressed Genes for Tumors | tissue samples with high or low expression of CTBP1-AS2 gene relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset. | |