| Name | DDX11 antisense RNA 1 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Long noncoding RNA DDX11‐AS1 has emerged as a multifunctional regulator with critical roles in both normal cell cycle processes and tumorigenesis. In non‐transformed cells, DDX11‐AS1 was originally shown to be required for proper sister chromatid cohesion and DNA replication through direct modulation of the helicase activity of DDX11 (see."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In numerous cancer types—including hepatocellular carcinoma, gastric cancer, colorectal cancer, osteosarcoma, esophageal cancer, bladder cancer, breast cancer, and non–small cell lung cancer—DDX11‐AS1 is frequently upregulated and correlates with poor clinical outcomes (see"}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "2", "end_ref": "8"}]}, {"type": "t", "text": ", and."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "9"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n Mechanistically, DDX11‐AS1 exerts its oncogenic functions primarily by serving as a competing endogenous RNA (ceRNA) that sponges various microRNAs. By sequestering miR‐873–5p, miR‐326, miR‐30d–5p, miR‐499b–5p, miR‐497, miR‐195–5p, miR‐34a–3p, and miR‐514b–3p (refer to"}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "4", "end_ref": "7"}, {"type": "fg_fs", "start_ref": "10", "end_ref": "12"}]}, {"type": "t", "text": ", and"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "13"}]}, {"type": "t", "text": ", it derepresses several key oncogenes. These include targets such as DDX11, LATS2, SPC18/SEC11A, IRS1, CDK6, SNAI1, ZEB2, MACC1, TRAF5, and TOP2A, which in turn stimulate cell proliferation, promote cell cycle progression, enhance migration and invasion, induce epithelial–mesenchymal transition, and even contribute to chemoresistance (see"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "9"}, {"type": "fg_f", "ref": "14"}]}, {"type": "t", "text": ", and."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "16"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n Beyond its ceRNA functions, DDX11‐AS1 also interacts with chromatin modifiers and transcriptional regulators such as EZH2, DNMT1, PARP1, and TAF1. These interactions add an additional epigenetic layer to its regulation of gene expression, further contributing to oncogenic signaling pathways such as PI3K/AKT and Wnt/β‐catenin (see"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}, {"type": "fg_f", "ref": "8"}]}, {"type": "t", "text": ", and."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "15"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n Collectively, these findings underscore the multifunctional and oncogenic nature of DDX11‐AS1. Its ability to modulate critical cellular processes—ranging from DNA replication and chromatid cohesion to the regulation of multiple oncogenic pathways via microRNA sponging and epigenetic interactions—positions DDX11‐AS1 as a promising prognostic biomarker and a potential therapeutic target across a wide spectrum of human cancers (see"}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "17", "end_ref": "19"}]}, {"type": "t", "text": ", and."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "12"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Francesco P Marchese, Elena Grossi, Oskar Marín-Béjar, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A Long Noncoding RNA Regulates Sister Chromatid Cohesion."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.molcel.2016.06.031"}], "href": "https://doi.org/10.1016/j.molcel.2016.06.031"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27477908"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27477908"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Yong Li, Wenlong Zhuang, Maosheng Huang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long noncoding RNA DDX11-AS1 epigenetically represses LATS2 by interacting with EZH2 and DNMT1 in hepatocellular carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Biophys Res Commun (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbrc.2019.05.042"}], "href": "https://doi.org/10.1016/j.bbrc.2019.05.042"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31097223"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31097223"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Yubin Feng, Maomao Wu, Shuang Hu, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNA DDX11-AS1 facilitates gastric cancer progression by regulating miR-873-5p/SPC18 axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Artif Cells Nanomed Biotechnol (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1080/21691401.2020.1726937"}], "href": "https://doi.org/10.1080/21691401.2020.1726937"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32054332"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32054332"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "J-B Tian, L Cao, G-L Dong "}, {"type": "b", "children": [{"type": "t", "text": "Long noncoding RNA DDX11-AS1 induced by YY1 accelerates colorectal cancer progression through targeting miR-873/CLDN7 axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Eur Rev Med Pharmacol Sci (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.26355/eurrev_201907_18309"}], "href": "https://doi.org/10.26355/eurrev_201907_18309"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31298324"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31298324"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "W Song, Y Qian, M-H Zhang, et al. 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| Synonyms | CONCR, SCAT4 |
| NCBI Gene ID | 100506660 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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DDX11-AS1 has 796 functional associations with biological entities spanning 1 categories (cell line, cell type or tissue) extracted from 8 datasets.
Click the + buttons to view associations for DDX11-AS1 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq | tissue samples with high or low expression of DDX11-AS1 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of DDX11-AS1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of DDX11-AS1 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of DDX11-AS1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of DDX11-AS1 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of DDX11-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles | cell lines with high or low expression of DDX11-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset. | |
| Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles | cell types and tissues with high or low DNA methylation of DDX11-AS1 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset. | |