DENND5B-AS1 Gene

Name DENND5B antisense RNA 1
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Two recent studies have integrated long noncoding RNA (lncRNA)–mediated competing endogenous RNA (ceRNA) network analyses in Wilms tumor to identify novel prognostic biomarkers."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " Within these networks, DENND5B‐AS1 was found to be upregulated in tumor tissues. Its high expression was significantly correlated with advanced tumor stage and poorer overall survival, suggesting that DENND5B‐AS1 may function as an oncogenic lncRNA. Acting as a ceRNA, DENND5B‐AS1 likely sponges specific microRNAs, thereby modulating the expression of messenger RNAs that are involved in cell proliferation and other tumorigenic processes. These findings highlight the potential role of DENND5B‐AS1 in Wilms tumor progression and underscore its promise both as a prognostic biomarker and as a candidate for further molecular investigation targeting the ceRNA regulatory axis.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Feng Zhang, Liping Zeng, Qinming Cai, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Comprehensive Analysis of a Long Noncoding RNA-Associated Competing Endogenous RNA Network in Wilms Tumor."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Control (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1177/1073274820936991"}], "href": "https://doi.org/10.1177/1073274820936991"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32597194"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32597194"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Hong Zheng, Bai-Hui Li, Chang Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Comprehensive Analysis of lncRNA-Mediated ceRNA Crosstalk and Identification of Prognostic Biomarkers in Wilms' Tumor."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biomed Res Int (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1155/2020/4951692"}], "href": "https://doi.org/10.1155/2020/4951692"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32149111"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32149111"}]}]}]}
NCBI Gene ID 100874249
API
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Predicted Functions View DENND5B-AS1's ARCHS4 Predicted Functions.
Co-expressed Genes View DENND5B-AS1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View DENND5B-AS1's ARCHS4 Predicted Functions.

Functional Associations

DENND5B-AS1 has 397 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 7 datasets.

Click the + buttons to view associations for DENND5B-AS1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of DENND5B-AS1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of DENND5B-AS1 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of DENND5B-AS1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of DENND5B-AS1 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of DENND5B-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of DENND5B-AS1 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles cell types and tissues with high or low DNA methylation of DENND5B-AS1 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset.