DISC2 Gene

HGNC Family Non-coding RNAs
Name disrupted in schizophrenia 2 (non-protein coding)
Description DISC2 is thought to specify a noncoding RNA molecule antisense to DISC1 (MIM 605210). Both genes were found to be disrupted by a translocation in a large schizophrenia (MIM 181500) kindred.[supplied by OMIM, Jul 2002]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n DISC2 is a gene located within the DISC locus on chromosome 1q42 that is disrupted by a balanced translocation linked to several major psychiatric disorders. Unlike its counterpart DISC1—which encodes a multifunctional scaffold protein with established roles in neurodevelopment, cytoskeletal organization, and synaptic signaling—DISC2 appears to be a long noncoding RNA oriented antisense to DISC1."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "4"}]}, {"type": "t", "text": " Its antisense arrangement is consistent with a regulatory role—possibly influencing DISC1 transcription, splicing, or transcript stability—that is a recurring theme at loci where noncoding antisense transcripts modulate their cognate “sense” genes.\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Although genetic linkage and association studies of the DISC locus have largely focused on DISC1 as the primary candidate underlying susceptibility to disorders such as schizophrenia, bipolar disorder, and major depression"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}, {"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": ", there is growing interest in clarifying the potential involvement of DISC2. Some reports have highlighted that—by virtue of its noncoding and antisense characteristics—DISC2 may contribute to disease pathogenesis indirectly via modulation of DISC1 expression and function."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "2", "end_ref": "4"}, {"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n In summary, while DISC1 has been extensively characterized for its direct roles in neuronal development and synaptic function, DISC2 is defined predominantly as a putative noncoding RNA. Its genomic configuration renders it a promising candidate for regulatory control of DISC1, and by extension, a modulator of neurobiological pathways implicated in psychiatric illness. Further functional studies will be essential to decipher the precise mechanisms by which DISC2 may influence DISC1 expression and contribute to disease phenotypes.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "J E Chubb, N J Bradshaw, D C Soares, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The DISC locus in psychiatric illness."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Psychiatry (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/sj.mp.4002106"}], "href": "https://doi.org/10.1038/sj.mp.4002106"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17912248"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17912248"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "D H Blackwood, A Fordyce, M T Walker, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Schizophrenia and affective disorders--cosegregation with a translocation at chromosome 1q42 that directly disrupts brain-expressed genes: clinical and P300 findings in a family."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Am J Hum Genet (2001)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1086/321969"}], "href": "https://doi.org/10.1086/321969"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "11443544"}], "href": "https://pubmed.ncbi.nlm.nih.gov/11443544"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "J K Millar, S Christie, S Anderson, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Genomic structure and localisation within a linkage hotspot of Disrupted In Schizophrenia 1, a gene disrupted by a translocation segregating with schizophrenia."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Psychiatry (2001)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/sj.mp.4000784"}], "href": "https://doi.org/10.1038/sj.mp.4000784"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "11317219"}], "href": "https://pubmed.ncbi.nlm.nih.gov/11317219"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "J K Millar, S Christie, C A Semple, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Chromosomal location and genomic structure of the human translin-associated factor X gene (TRAX; TSNAX) revealed by intergenic splicing to DISC1, a gene disrupted by a translocation segregating with schizophrenia."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Genomics (2000)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1006/geno.2000.6239"}], "href": "https://doi.org/10.1006/geno.2000.6239"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "10945471"}], "href": "https://pubmed.ncbi.nlm.nih.gov/10945471"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Colin A Hodgkinson, David Goldman, Judith Jaeger, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Disrupted in schizophrenia 1 (DISC1): association with schizophrenia, schizoaffective disorder, and bipolar disorder."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Am J Hum Genet (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1086/425586"}], "href": "https://doi.org/10.1086/425586"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15386212"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15386212"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Martin S Taylor, Rebecca S Devon, J Kirsty Millar, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Evolutionary constraints on the Disrupted in Schizophrenia locus."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Genomics (2003)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/s0888-7543(02)00026-5"}], "href": "https://doi.org/10.1016/s0888-7543(02"}, {"type": "t", "text": "00026-5) PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12573262"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12573262"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Bahar Naghavi-Gargari, Alireza Zahirodin, Sayyed Mohammad Hossein Ghaderian, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Significant increasing of DISC2 long non-coding RNA expression as a potential biomarker in bipolar disorder."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Neurosci Lett (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.neulet.2018.12.044"}], "href": "https://doi.org/10.1016/j.neulet.2018.12.044"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30599263"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30599263"}]}]}]}
Synonyms NCRNA00015, DISC1OS, DISC1-AS1
NCBI Gene ID 27184
API
Download Associations
Predicted Functions View DISC2's ARCHS4 Predicted Functions.
Co-expressed Genes View DISC2's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View DISC2's ARCHS4 Predicted Functions.

Functional Associations

DISC2 has 489 functional associations with biological entities spanning 5 categories (molecular profile, disease, phenotype or trait, functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 17 datasets.

Click the + buttons to view associations for DISC2 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of DISC2 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
ChEA Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of DISC2 gene from the CHEA Transcription Factor Binding Site Profiles dataset.
ChEA Transcription Factor Targets transcription factors binding the promoter of DISC2 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of DISC2 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
CTD Gene-Disease Associations diseases associated with DISC2 gene/protein from the curated CTD Gene-Disease Associations dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at DISC2 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of DISC2 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of DISC2 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GeneRIF Biological Term Annotations biological terms co-occuring with DISC2 gene in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.
HPO Gene-Disease Associations phenotypes associated with DISC2 gene by mapping known disease genes to disease phenotypes from the HPO Gene-Disease Associations dataset.
HuGE Navigator Gene-Phenotype Associations phenotypes associated with DISC2 gene by text-mining GWAS publications from the HuGE Navigator Gene-Phenotype Associations dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of DISC2 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of DISC2 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of DISC2 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
OMIM Gene-Disease Associations phenotypes associated with DISC2 gene from the curated OMIM Gene-Disease Associations dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at DISC2 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.
TCGA Signatures of Differentially Expressed Genes for Tumors tissue samples with high or low expression of DISC2 gene relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.