DNM3OS Gene

Name DNM3 opposite strand/antisense RNA
Description Enables miRNA inhibitor activity via base-pairing. Involved in cellular response to transforming growth factor beta stimulus and regulation of macromolecule metabolic process. Predicted to be part of RISC complex. [provided by Alliance of Genome Resources, Mar 2025]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n The long non‐coding RNA DNM3OS (Dynamin 3 Opposite Strand) has emerged as a multifunctional regulatory molecule that contributes to diverse biological processes and disease states. In several cancer types, DNM3OS is frequently overexpressed and acts as an oncogenic hub by modulating microRNA (miRNA) function and downstream gene expression. For example, in esophageal squamous cell carcinoma its elevated expression is linked to enhanced radioresistance"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ", while in gastric cancer and hepatocellular carcinoma it promotes cell proliferation, migration, invasion, and epithelial–mesenchymal transition (EMT) through ceRNA mechanisms and epigenetic regulation."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " In ovarian and cervical cancers, DNM3OS modulates the bioavailability of tumor‐suppressive miRNAs (such as miR‑193a‑3p and miR‑214) to increase the levels of oncogenic effectors like MAP3K3 and other pro‐tumorigenic factors."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n Beyond oncology, DNM3OS plays important roles in non‐malignant diseases. In osteoarthritis, it functions as a competitive endogenous RNA (ceRNA) that sponges miR‑126, thereby modulating insulin‐like growth factor 1 (IGF1) expression, which in turn impacts chondrocyte proliferation and apoptosis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": " In the context of diabetes‐associated vascular complications, DNM3OS is upregulated in macrophages, suggesting a role in inflammatory dysfunction."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": " Moreover, in cardiac fibrosis, elevated DNM3OS expression potentiates activation of cardiac fibroblasts by modulating the transforming growth factor‑β1/Smad2/3 pathway"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "8"}]}, {"type": "t", "text": ", and in skeletal development, proper DNM3OS levels sustain chondrocyte proliferation and bone growth through regulation of nerve growth factor (NGF) signaling."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "9"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n In neurological disorders, such as Huntington’s disease, DNM3OS participates in a regulatory circuit by sponging miR‑196b‑5p, which leads to altered glyceraldehyde‑3‑phosphate dehydrogenase (GAPDH) expression and contributes to pathogenic aggregate formation."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "10"}]}, {"type": "t", "text": " In addition, transcription factors like TWIST1 have been shown to induce DNM3OS expression (harboring miR‑199a/214 clusters), thereby integrating it into broader networks that control tumorigenesis and immune evasion in disorders such as Sézary syndrome."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "11"}]}, {"type": "t", "text": " Finally, in mesenchymal stem cells undergoing chondrogenic differentiation under hypoxic conditions, modulation of the DNM3OS/miR‑127‑5p/GREM2 axis further underscores its versatile role in regulating cell fate decisions."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "12"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n Collectively, these studies highlight DNM3OS as a key regulatory hub that, by acting as a molecular sponge and modulating epigenetic as well as transcriptional programs, governs critical pathways in cancer progression, fibrosis, inflammation, neural degeneration, and skeletal development. Its multifaceted functions, often mediated via its embedded miRNA clusters or through interactions with proteins (e.g., KDM6B, HDAC6), offer promising avenues for targeted therapeutics across a range of human diseases.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Hongfang Zhang, Yuhui Hua, Zhenzhen Jiang, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNA DNM3OS promotes tumor progression and EMT in gastric cancer by associating with Snail."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Biophys Res Commun (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbrc.2019.02.030"}], "href": "https://doi.org/10.1016/j.bbrc.2019.02.030"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30770102"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30770102"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Wei Wang, Qun Wang, Da-Bing Huang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Tumor-associated mesenchymal stem cells promote hepatocellular carcinoma metastasis via a DNM3OS/KDM6B/TIAM1 axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Lett (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.canlet.2021.01.011"}], "href": "https://doi.org/10.1016/j.canlet.2021.01.011"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33472090"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33472090"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Lei He, Guolin He "}, {"type": "b", "children": [{"type": "t", "text": "DNM3OS Facilitates Ovarian Cancer Progression by Regulating miR-193a-3p/MAP3K3 Axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Yonsei Med J (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3349/ymj.2021.62.6.535"}], "href": "https://doi.org/10.3349/ymj.2021.62.6.535"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34027641"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34027641"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Hongjuan Song, Yuan Liu, Hui Liang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "SPINT1-AS1 Drives Cervical Cancer Progression via Repressing miR-214 Biogenesis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Front Cell Dev Biol (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3389/fcell.2021.691140"}], "href": "https://doi.org/10.3389/fcell.2021.691140"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34350182"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34350182"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Di Ai, Fang Yu "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA DNM3OS promotes proliferation and inhibits apoptosis through modulating IGF1 expression by sponging MiR-126 in CHON-001 cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Diagn Pathol (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s13000-019-0877-2"}], "href": "https://doi.org/10.1186/s13000-019-0877-2"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31526393"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31526393"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Sadhan Das, Marpadga A Reddy, Parijat Senapati, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Diabetes Mellitus-Induced Long Noncoding RNA Dnm3os Regulates Macrophage Functions and Inflammation via Nuclear Mechanisms."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Arterioscler Thromb Vasc Biol (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1161/ATVBAHA.117.310663"}], "href": "https://doi.org/10.1161/ATVBAHA.117.310663"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29930005"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29930005"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Qihang Kong, Junteng Zhou, Geer Tian, et al. "}, {"type": "b", "children": [{"type": "t", "text": "[The potential role of long non-coding RNA Dnm3os in the activation of cardiac fibroblasts]."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sheng Wu Yi Xue Gong Cheng Xue Za Zhi (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.7507/1001-5515.202102021"}], "href": "https://doi.org/10.7507/1001-5515.202102021"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34180204"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34180204"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Ting-Ting Yu, Qiu-Fan Xu, Si-Yang Li, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Deletion at an 1q24 locus reveals a critical role of long noncoding RNA DNM3OS in skeletal development."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Biosci (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s13578-021-00559-8"}], "href": "https://doi.org/10.1186/s13578-021-00559-8"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33653390"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33653390"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Xiaoyu Dong, Shuyan Cong "}, {"type": "b", "children": [{"type": "t", "text": "DNM3OS regulates GAPDH expression and influences the molecular pathogenesis of Huntington's disease."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Mol Med (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/jcmm.16838"}], "href": "https://doi.org/10.1111/jcmm.16838"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34369082"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34369082"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Jan P Nicolay, Moritz Felcht, Kai Schledzewski, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Sézary syndrome: old enigmas, new targets."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Dtsch Dermatol Ges (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/ddg.12900"}], "href": "https://doi.org/10.1111/ddg.12900"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26972187"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26972187"}]}, {"type": "r", "ref": 12, "children": [{"type": "t", "text": "Xiaozhong Zhou, Wangyang Xu, Yeyang Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA DNM3OS regulates GREM2 via miR-127-5p to suppress early chondrogenic differentiation of rat mesenchymal stem cells under hypoxic conditions."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Mol Biol Lett (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s11658-021-00269-6"}], "href": "https://doi.org/10.1186/s11658-021-00269-6"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34049478"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34049478"}]}]}]}
Synonyms MIR199A2HG, DNM3-AS1
NCBI Gene ID 100628315
API
Download Associations
Predicted Functions View DNM3OS's ARCHS4 Predicted Functions.
Co-expressed Genes View DNM3OS's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View DNM3OS's ARCHS4 Predicted Functions.

Functional Associations

DNM3OS has 1,154 functional associations with biological entities spanning 7 categories (molecular profile, organism, disease, phenotype or trait, functional term, phrase or reference, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 22 datasets.

Click the + buttons to view associations for DNM3OS from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
BioGPS Mouse Cell Type and Tissue Gene Expression Profiles cell types and tissues with high or low expression of DNM3OS gene relative to other cell types and tissues from the BioGPS Mouse Cell Type and Tissue Gene Expression Profiles dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of DNM3OS gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
CCLE Cell Line Gene Expression Profiles cell lines with high or low expression of DNM3OS gene relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset.
ChEA Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of DNM3OS gene from the CHEA Transcription Factor Binding Site Profiles dataset.
ChEA Transcription Factor Targets transcription factors binding the promoter of DNM3OS gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of DNM3OS gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
CTD Gene-Disease Associations diseases associated with DNM3OS gene/protein from the curated CTD Gene-Disease Associations dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at DNM3OS gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of DNM3OS gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of DNM3OS gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
ESCAPE Omics Signatures of Genes and Proteins for Stem Cells PubMedIDs of publications reporting gene signatures containing DNM3OS from the ESCAPE Omics Signatures of Genes and Proteins for Stem Cells dataset.
GeneSigDB Published Gene Signatures PubMedIDs of publications reporting gene signatures containing DNM3OS from the GeneSigDB Published Gene Signatures dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of DNM3OS gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of DNM3OS gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations transcription factor perturbations changing expression of DNM3OS gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Viral Infections virus perturbations changing expression of DNM3OS gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of DNM3OS gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of DNM3OS gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of DNM3OS gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of DNM3OS gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
MPO Gene-Phenotype Associations phenotypes of transgenic mice caused by DNM3OS gene mutations from the MPO Gene-Phenotype Associations dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at DNM3OS gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.