| Name | DSCAM intronic transcript 1 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Down syndrome (DS) individuals with partial trisomy 21 that include the candidate region on 21q22.2 (0.96 Mb) are at increased risk for congenital heart disease (CHD)."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " This region harbors both protein‐coding genes (DSCAM, BACE2, PLAC4) and several non‐coding RNAs, including DSCAM-IT1. Although the specific molecular function of DSCAM-IT1 has not been fully elucidated, its localization within this critical DS CHD candidate region suggests that it may play a regulatory role in gene expression during cardiac development. As a long non-coding RNA, DSCAM-IT1 could potentially contribute to the multifactorial pathogenesis of CHD in DS by influencing the transcriptional activity of nearby genes or modulating epigenetic processes. Further investigations will be necessary to characterize its precise function and mechanistic contributions to CHD.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Maria Chiara Pelleri, Elena Gennari, Chiara Locatelli, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Genotype-phenotype correlation for congenital heart disease in Down syndrome through analysis of partial trisomy 21 cases."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Genomics (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.ygeno.2017.06.004"}], "href": "https://doi.org/10.1016/j.ygeno.2017.06.004"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28648597"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28648597"}]}]}]}
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| Synonyms | ZAG4 |
| NCBI Gene ID | 100874326 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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DSCAM-IT1 has 156 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 5 datasets.
Click the + buttons to view associations for DSCAM-IT1 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of DSCAM-IT1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of DSCAM-IT1 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of DSCAM-IT1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of DSCAM-IT1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of DSCAM-IT1 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |