ELOVL2-AS1 Gene

Name ELOVL2 antisense RNA 1
Description Predicted to be involved in RNA processing. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Mar 2025]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n ELOVL2‐AS1 has emerged as a functionally important long noncoding RNA in breast cancer. Recent studies have identified ELOVL2‐AS1 as a key enhancer RNA region whose expression is tightly linked to that of its target gene, ELOVL2, through direct chromatin interactions (1). In breast cancer, particularly in triple‐negative subtypes, both ELOVL2‐AS1 and ELOVL2 are expressed at significantly lower levels relative to luminal A subtypes. This reduction is associated with decreased expression of cilia‐related genes, suggesting that diminished ELOVL2‐AS1 levels may contribute to the loss of cilia characteristics and promote increased cell migration and metastatic potential. Functional assays have confirmed that overexpression of ELOVL2‐AS1 in triple‐negative breast cancer cells notably inhibits migration, implicating this lncRNA as a potential tumor suppressor. Furthermore, its inclusion in prognostic immune‐related lncRNA risk models underscores its value not only in reflecting tumor aggressiveness and patient outcome but also in potentially modulating the tumor microenvironment (2).\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n (1)"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "   (2)."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": ""}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Mingda Zhu, Jingyang Zhang, Guangyu Li, et al. "}, {"type": "b", "children": [{"type": "t", "text": "ELOVL2-AS1 inhibits migration of triple negative breast cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PeerJ (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.7717/peerj.13264"}], "href": "https://doi.org/10.7717/peerj.13264"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35441059"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35441059"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Ran Xiao, Meng Yang, Yuanyuan Tan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of Five Immune-Related lncRNAs Predicting Survival and Tumor Microenvironment Characteristics in Breast Cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Comput Math Methods Med (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1155/2021/6676692"}], "href": "https://doi.org/10.1155/2021/6676692"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33727952"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33727952"}]}]}]}
NCBI Gene ID 100506409
API
Download Associations
Predicted Functions View ELOVL2-AS1's ARCHS4 Predicted Functions.
Co-expressed Genes View ELOVL2-AS1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View ELOVL2-AS1's ARCHS4 Predicted Functions.

Functional Associations

ELOVL2-AS1 has 177 functional associations with biological entities spanning 5 categories (organism, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 11 datasets.

Click the + buttons to view associations for ELOVL2-AS1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of ELOVL2-AS1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
CellMarker Gene-Cell Type Associations cell types associated with ELOVL2-AS1 gene from the CellMarker Gene-Cell Type Associations dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of ELOVL2-AS1 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
GEO Signatures of Differentially Expressed Genes for Diseases disease perturbations changing expression of ELOVL2-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of ELOVL2-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GEO Signatures of Differentially Expressed Genes for Viral Infections virus perturbations changing expression of ELOVL2-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of ELOVL2-AS1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GWAS Catalog SNP-Phenotype Associations phenotypes associated with ELOVL2-AS1 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of ELOVL2-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of ELOVL2-AS1 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles cell types and tissues with high or low DNA methylation of ELOVL2-AS1 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset.