EPHA5-AS1 Gene

Name EPHA5 antisense RNA 1
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n EPHA5‐AS1 appears to be one of several long noncoding RNAs whose dysregulation is linked to disease‐associated cellular processes. In one study focused on liver fibrosis"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ", analysis of human hepatic stellate cell myofibroblasts revealed that many lncRNAs—including those such as EPHA5‐AS1—are induced by transforming growth factor–β signaling and are enriched at super‐enhancers. Such lncRNAs show a restricted expression pattern in hepatic stellate cells compared with a broad panel of human tissues and are co‐expressed with key extracellular matrix genes; this suggests they may play roles in orchestrating extracellular matrix modulation and fibrotic scar formation during liver disease progression. In a separate investigation into thyroid cancer"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": ", numerous lncRNAs were identified as aberrantly expressed and some were associated with copy number variations as well as poor clinical outcomes. Although EPHA5‐AS1 is not highlighted individually by functional experiments in this context, its inclusion among differentially regulated lncRNAs implies that it may also contribute to thyroid tumorigenesis—potentially influencing cell proliferation, invasion, and survival. \n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Overall, the available findings support a role for EPHA5‐AS1 as a regulatory RNA that, depending on cellular context, may contribute to extracellular matrix remodeling in fibrotic liver disease as well as to oncogenic processes in thyroid cancer.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Chan Zhou, Samuel R York, Jennifer Y Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long noncoding RNAs expressed in human hepatic stellate cells form networks with extracellular matrix proteins."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Genome Med (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s13073-016-0285-0"}], "href": "https://doi.org/10.1186/s13073-016-0285-0"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27007663"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27007663"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Wei Lu, Yongcan Xu, Jiewei Xu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of differential expressed lncRNAs in human thyroid cancer by a genome-wide analyses."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Med (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/cam4.1627"}], "href": "https://doi.org/10.1002/cam4.1627"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29923329"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29923329"}]}]}]}
NCBI Gene ID 100144602
API
Download Associations
Predicted Functions View EPHA5-AS1's ARCHS4 Predicted Functions.
Co-expressed Genes View EPHA5-AS1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View EPHA5-AS1's ARCHS4 Predicted Functions.

Functional Associations

EPHA5-AS1 has 363 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 7 datasets.

Click the + buttons to view associations for EPHA5-AS1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles tissues with high or low expression of EPHA5-AS1 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset.
Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq tissue samples with high or low expression of EPHA5-AS1 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset.
Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles tissues with high or low expression of EPHA5-AS1 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of EPHA5-AS1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of EPHA5-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GTEx Tissue-Specific Aging Signatures tissue samples with high or low expression of EPHA5-AS1 gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of EPHA5-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.