FAM138A Gene

Name family with sequence similarity 138, member A
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n While neither abstract provides a detailed functional characterization of FAM138A, both studies offer context that helps frame its potential significance. In the Human Proteome Project report (1), the authors describe the ongoing effort to validate protein expression for nearly 20,000 protein‐coding genes. In doing so, they identify a cohort of “missing proteins” that lack high‐confidence evidence; FAM138A may be among these proteins whose existence and function have yet to be conclusively documented. In a complementary approach, the RNA sequencing study of retinoblastoma (2) profiles widespread transcriptional changes—including those in non‐coding RNAs—emphasizing the complexity of gene regulation in disease. Although FAM138A is not discussed explicitly in the retinoblastoma work, the study underlines that many genes with uncertain functions are being re‐examined in disease contexts to uncover potential roles in cellular regulation or as biomarkers. Collectively, these studies suggest that while the function of FAM138A remains largely elusive, it is categorized amongst genes that warrant further investigation both from a proteomic validation perspective and within the broader landscape of transcriptional deregulation."}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ""}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Lydie Lane, Amos Bairoch, Ronald C Beavis, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Metrics for the Human Proteome Project 2013-2014 and strategies for finding missing proteins."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Proteome Res (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1021/pr401144x"}], "href": "https://doi.org/10.1021/pr401144x"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24364385"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24364385"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Swetha Rajasekaran, Lakshmi Dhevi Nagarajha Selvan, Kathleen Dotts, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Non-coding and Coding Transcriptional Profiles Are Significantly Altered in Pediatric Retinoblastoma Tumors."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Front Oncol (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3389/fonc.2019.00221"}], "href": "https://doi.org/10.3389/fonc.2019.00221"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31058073"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31058073"}]}]}]}
Synonyms FAM138F
NCBI Gene ID 645520
API
Download Associations
Predicted Functions View FAM138A's ARCHS4 Predicted Functions.
Co-expressed Genes View FAM138A's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View FAM138A's ARCHS4 Predicted Functions.

Functional Associations

FAM138A has 245 functional associations with biological entities spanning 3 categories (molecular profile, cell line, cell type or tissue, gene, protein or microRNA) extracted from 8 datasets.

Click the + buttons to view associations for FAM138A from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of FAM138A gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
ChEA Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of FAM138A gene from the CHEA Transcription Factor Binding Site Profiles dataset.
ChEA Transcription Factor Targets transcription factors binding the promoter of FAM138A gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of FAM138A gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of FAM138A gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of FAM138A gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of FAM138A gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of FAM138A gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.