| Name | family with sequence similarity 138, member B |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n FAM138B, a long non‐coding RNA, appears to play a multifaceted role in the regulation of disease processes, particularly in hepatocellular carcinoma (HCC) and endometriosis. In one study, FAM138B was identified as part of a competing endogenous RNA (ceRNA) network in hepatitis B virus‐induced HCC, where it formed an axis with hsa‐miR‐30c to modulate the expression of cell cycle regulators CCNE2 and RRM2, implicating an involvement in the p53 signaling pathway and tumor progression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n A separate investigation focusing on HCC reported that linc‐FAM138B expression was reduced in tumor tissues and cell lines; its exosomal form inhibited proliferation, migration, and invasion of HCC cells by sponging miR‐765. This finding not only linked low linc‐FAM138B expression to a poor prognosis in HCC patients but also underscored its tumor‐suppressive function."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Additionally, FAM138B has been reported to be significantly downregulated in plasma extracellular vesicles from patients with endometriosis, suggesting its potential utility as a non‐invasive diagnostic biomarker for this condition."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Collectively, these studies highlight the important regulatory functions of FAM138B in modulating key signaling pathways in HCC through distinct ceRNA mechanisms, as well as its emerging role in the molecular diagnosis of endometriosis.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Jing Xu, Jing Zhang, Fenglian Shan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "SSTR5‑AS1 functions as a ceRNA to regulate CA2 by sponging miR‑15b‑5p for the development and prognosis of HBV‑related hepatocellular carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Med Rep (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3892/mmr.2019.10736"}], "href": "https://doi.org/10.3892/mmr.2019.10736"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31638225"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31638225"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Chenyi Zhuo, Tingzhuang Yi, Jian Pu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Exosomal linc-FAM138B from cancer cells alleviates hepatocellular carcinoma progression via regulating miR-765."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Aging (Albany NY) (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.18632/aging.202430"}], "href": "https://doi.org/10.18632/aging.202430"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33401249"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33401249"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Shan Shan, Yeping Yang, Jilan Jiang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Extracellular vesicle-derived long non-coding RNA as circulating biomarkers for endometriosis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Reprod Biomed Online (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.rbmo.2021.11.019"}], "href": "https://doi.org/10.1016/j.rbmo.2021.11.019"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35341703"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35341703"}]}]}]}
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| Synonyms | BA395L14.6 |
| NCBI Gene ID | 654412 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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FAM138B has 647 functional associations with biological entities spanning 3 categories (molecular profile, cell line, cell type or tissue, gene, protein or microRNA) extracted from 12 datasets.
Click the + buttons to view associations for FAM138B from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of FAM138B gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| ChEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of FAM138B gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
| ChEA Transcription Factor Targets | transcription factors binding the promoter of FAM138B gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at FAM138B gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of FAM138B gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of FAM138B gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of FAM138B gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of FAM138B gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of FAM138B gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of FAM138B gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at FAM138B gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |
| TCGA Signatures of Differentially Expressed Genes for Tumors | tissue samples with high or low expression of FAM138B gene relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset. | |