| Name | FAM170B antisense RNA 1 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Integrated analyses across multiple disease contexts have begun to shed light on the potential regulatory roles of long non‐coding RNAs. In particular, FAM170B‑AS1 has emerged as a candidate lncRNA of interest. Differential expression studies in hepatocellular carcinoma (HCC) have identified a spectrum of lncRNAs that appear to influence tumor cell proliferation, invasiveness, and dissemination; FAM170B‑AS1 is among those highlighted as potentially modulating proliferation pathways (see"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "and."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " Similarly, in diabetic foot ulcers (DFUs), analyses of differentially expressed lncRNAs have implicated regulatory networks—encompassing components of the ERK cascade, centrosome duplication, and DNA repair processes—that may contribute to tissue repair and wound healing; within this framework, FAM170B‑AS1 is suggested to participate in these regulatory processes."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": " Moreover, exome‑wide association studies investigating early‑onset coronary artery disease (CAD) have identified genetic variants in non‑coding regions that potentially alter regulatory networks governing vascular function and inflammatory responses, hinting at a role for lncRNAs such as FAM170B‑AS1 in conferring disease susceptibility."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": " Together, these findings suggest that FAM170B‑AS1 may act as a modulatory molecule within gene expression networks that underlie pathological processes in HCC, DFUs, and CAD. Notwithstanding these promising associations, further mechanistic studies are warranted to fully elucidate the molecular functions of FAM170B‑AS1 and its potential as a therapeutic target.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Tiago Falcon, Martiela Freitas, Ana Carolina Mello, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Analysis of the Cancer Genome Atlas Data Reveals Novel Putative ncRNAs Targets in Hepatocellular Carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biomed Res Int (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1155/2018/2864120"}], "href": "https://doi.org/10.1155/2018/2864120"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30046591"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30046591"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Kangsheng Tu, Qiongzhu Dong, Junyan Tao "}, {"type": "b", "children": [{"type": "t", "text": "Role of ncRNAs in Hepatocellular Carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biomed Res Int (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1155/2018/3014543"}], "href": "https://doi.org/10.1155/2018/3014543"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30151377"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30151377"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Pijun Yu, Jian Guo, Junjie Li, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Co-expression network analysis revealing the key lncRNAs in diabetic foot ulcers."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Arch Med Sci (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.5114/aoms.2019.84699"}], "href": "https://doi.org/10.5114/aoms.2019.84699"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31572456"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31572456"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Yoshiji Yamada, Yoshiki Yasukochi, Kimihiko Kato, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of 26 novel loci that confer susceptibility to early-onset coronary artery disease in a Japanese population."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biomed Rep (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3892/br.2018.1152"}], "href": "https://doi.org/10.3892/br.2018.1152"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30402224"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30402224"}]}]}]}
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| NCBI Gene ID | 100506733 |
| API | |
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| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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FAM170B-AS1 has 182 functional associations with biological entities spanning 3 categories (chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 10 datasets.
Click the + buttons to view associations for FAM170B-AS1 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of FAM170B-AS1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of FAM170B-AS1 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of FAM170B-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Kinase Perturbations | kinase perturbations changing expression of FAM170B-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of FAM170B-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations | transcription factor perturbations changing expression of FAM170B-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of FAM170B-AS1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of FAM170B-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of FAM170B-AS1 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles | cell types and tissues with high or low DNA methylation of FAM170B-AS1 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset. | |