FAM83C-AS1 Gene

Name FAM83C antisense RNA 1
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n FAM83C‐AS1 is a long non‐coding RNA that has emerged as an oncogenic regulator in gastrointestinal tumors. In colon cancer, elevated levels of FAM83C‐AS1 are significantly associated with advanced pathological features and correlate with poor overall and disease‐free survival, suggesting its value as both a diagnostic and prognostic biomarker. In addition, gene set enrichment analyses imply that FAM83C‐AS1 is involved in immune‐related pathways, as its expression is linked to the infiltration of dendritic cells and T helper cells and may even predict response to immunotherapy."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n In colorectal cancer, FAM83C‐AS1 has been shown to exert oncogenic effects by downregulating the tumor suppressor gene SEMA3F. Mechanistically, FAM83C‐AS1 promotes the enrichment of the repressive H3K27me3 mark on the SEMA3F promoter through the upregulation of EZH2. This process is further facilitated by the recruitment of the EZH2‐stabilizing factor ZRANB1, collectively contributing to the malignant transformation of colorectal cells."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Although studies in glioblastoma have primarily focused on oncogenes such as PLAGL2 that enforce stem cell–like characteristics by modulating pathways like Wnt/β‐catenin"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": ",\n the emerging role of FAM83C‐AS1 in gastrointestinal tumors reinforces the concept that non‐coding RNAs can critically influence tumor behavior by regulating both cell–intrinsic oncogenic pathways and the tumor immune microenvironment.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Guanghui Li, Hao Feng, Qing Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of immune infiltration-related LncRNA FAM83C-AS1 for predicting prognosis and immunotherapy response in colon cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Transpl Immunol (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.trim.2021.101481"}], "href": "https://doi.org/10.1016/j.trim.2021.101481"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34624486"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34624486"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Weinan Xue, Fan Wang, Peng Han, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The oncogenic role of LncRNA FAM83C-AS1 in colorectal cancer development by epigenetically inhibits SEMA3F via stabilizing EZH2."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Aging (Albany NY) (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.18632/aging.103835"}], "href": "https://doi.org/10.18632/aging.103835"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33109776"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33109776"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Hongwu Zheng, Haoqiang Ying, Ruprecht Wiedemeyer, et al. "}, {"type": "b", "children": [{"type": "t", "text": "PLAGL2 regulates Wnt signaling to impede differentiation in neural stem cells and gliomas."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Cell (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.ccr.2010.03.020"}], "href": "https://doi.org/10.1016/j.ccr.2010.03.020"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20478531"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20478531"}]}]}]}
Synonyms C20ORF120, DJ614O4.3, NCRNA00154
NCBI Gene ID 140846
API
Download Associations
Predicted Functions View FAM83C-AS1's ARCHS4 Predicted Functions.
Co-expressed Genes View FAM83C-AS1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View FAM83C-AS1's ARCHS4 Predicted Functions.

Functional Associations

FAM83C-AS1 has 6 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 3 datasets.

Click the + buttons to view associations for FAM83C-AS1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of FAM83C-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Kinase Perturbations kinase perturbations changing expression of FAM83C-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of FAM83C-AS1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.