| HGNC Family | Non-coding RNAs |
| Name | FOXC1 upstream transcript (non-protein coding) |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n FOXCUT is a long non‐coding RNA located immediately upstream of the FOXC1 gene that has emerged as an important regulator in multiple cancer types. In many tumors—including oral squamous cell carcinoma, esophageal squamous cell carcinoma, nasopharyngeal carcinoma, basal‐like or triple‐negative breast cancer, endometrial cancer, colorectal cancer, prostate cancer, and gastric adenocarcinoma—FOXCUT is markedly overexpressed, and its expression is strongly positively correlated with that of the transcription factor FOXC1."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "9"}]}, {"type": "t", "text": " Functional studies consistently show that downregulation of FOXCUT leads to reduced FOXC1 expression along with significant inhibition of cell proliferation, migration, invasion, and epithelial–mesenchymal transition. These effects are accompanied by decreased levels of several key downstream factors including matrix metalloproteinases, vascular endothelial growth factor A, and interference with pro-growth signaling pathways such as PI3K/AKT."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}, {"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": " In contrast, in choroidal melanoma, FOXCUT is downregulated and—in conjunction with miR-296-3p—exerts tumor-suppressive effects by coordinately targeting MMP-2 and MMP-9."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "10"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n Overall, these findings indicate that FOXCUT predominantly functions as an oncogenic long noncoding RNA through modulation of FOXC1, thereby promoting tumor progression and poor clinical outcomes. Its aberrant overexpression renders the FOXCUT/FOXC1 axis a promising prognostic biomarker and a potential therapeutic target in various malignancies. Moreover, interventions such as treatment with dendrosome curcumin that reduce FOXCUT expression highlight its potential for targeted cancer therapy."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "11"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Xiang-pan Kong, Jie Yao, Wei Luo, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The expression and functional role of a FOXC1 related mRNA-lncRNA pair in oral squamous cell carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell Biochem (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s11010-014-2093-4"}], "href": "https://doi.org/10.1007/s11010-014-2093-4"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24889262"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24889262"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Fei Pan, Jie Yao, Yang Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A novel long non-coding RNA FOXCUT and mRNA FOXC1 pair promote progression and predict poor prognosis in esophageal squamous cell carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Int J Clin Exp Pathol (2014)"}]}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25031703"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25031703"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Yu-Zhong Xu, Fang-Fang Chen, Yu Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The long noncoding RNA FOXCUT promotes proliferation and migration by targeting FOXC1 in nasopharyngeal carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Tumour Biol (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1177/1010428317706054"}], "href": "https://doi.org/10.1177/1010428317706054"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28635400"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28635400"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Juntao Liu, Lei Shen, Jie Yao, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Forkhead box C1 promoter upstream transcript, a novel long non-coding RNA, regulates proliferation and migration in basal-like breast cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Med Rep (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3892/mmr.2014.3089"}], "href": "https://doi.org/10.3892/mmr.2014.3089"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25516208"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25516208"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Xinyu Yang, Xiumin Zhao, Ling Cheng, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA FOXCUT Stimulates the Progression of Endometrial Cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Crit Rev Eukaryot Gene Expr (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1615/CritRevEukaryotGeneExpr.2021038472"}], "href": "https://doi.org/10.1615/CritRevEukaryotGeneExpr.2021038472"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34591391"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34591391"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Xiaojie Zhang, Shanyong Yi, Guochen Xing, et al. "}, {"type": "b", "children": [{"type": "t", "text": "FOXCUT Promotes the Proliferation and Invasion by Activating FOXC1/PI3K/AKT Pathway in Colorectal Cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Manag Res (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.2147/CMAR.S259801"}], "href": "https://doi.org/10.2147/CMAR.S259801"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32801872"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32801872"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Zeeba Kamaliyan, Reza Mirfakhraie, Ghasem Azizi-Tabesh, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The role of FOXC1/FOXCUT/DANCR axis in triple negative breast cancer: a bioinformatics and experimental approach."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Biol Rep (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s11033-021-07093-3"}], "href": "https://doi.org/10.1007/s11033-021-07093-3"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35066769"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35066769"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Sahar Rostami, Marjan Nabi, Parinaz Naghavi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Overexpression of the Long Non-Coding RNA NeSt and FOXCUT in Early Stages of Prostate Cancer Samples as Promising Biomarkers."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Clin Lab (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.7754/Clin.Lab.2019.190332"}], "href": "https://doi.org/10.7754/Clin.Lab.2019.190332"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31710451"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31710451"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "D-L Zhao, G Shen "}, {"type": "b", "children": [{"type": "t", "text": "Verification of expressions of lncRNA FOXCUT in gastric adenocarcinoma patients and its effects on cell biological function based on TCGA database."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Eur Rev Med Pharmacol Sci (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.26355/eurrev_201907_18427"}], "href": "https://doi.org/10.26355/eurrev_201907_18427"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31364114"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31364114"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Xinhe Wang, Yuedong Hu, Jianyi Cui, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Coordinated targeting of MMP-2/MMP-9 by miR-296-3p/FOXCUT exerts tumor-suppressing effects in choroidal malignant melanoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell Biochem (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s11010-017-3248-x"}], "href": "https://doi.org/10.1007/s11010-017-3248-x"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29260433"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29260433"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Yasemin Khudiar Alghanimi, Abdolmajid Ghasemian "}, {"type": "b", "children": [{"type": "t", "text": "Inhibitory Traits of Dendrosome Curcumin (DNC) on Breast Cancer Compared to Curcumin Single Compound."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Gastrointest Cancer (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s12029-019-00273-2"}], "href": "https://doi.org/10.1007/s12029-019-00273-2"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31286422"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31286422"}]}]}]}
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| Synonyms | TCONS_00011636, LINC01379 |
| NCBI Gene ID | 101927703 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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FOXCUT has 0 functional associations with biological entities spanning 0 categories () extracted from 0 datasets.
Click the + buttons to view associations for FOXCUT from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary |
|---|