FOXN3-AS2 Gene

Name FOXN3 antisense RNA 2
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Two recent studies underscore the pivotal roles of long non‑coding RNAs (lncRNAs) in disease settings, with one study highlighting the potential prognostic value of FOXN3‑AS2 in lung adenocarcinoma. In the analysis of lung adenocarcinoma, a five‑lncRNA signature—including FOXN3‑AS2—was established through integrated RNA‐sequencing data and clinical survival information to stratify patients by risk of recurrence or metastasis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In this context, FOXN3‑AS2 is considered part of a prognostic marker panel whose target genes are enriched in key cellular processes such as cell receptor‑mediated signaling and cell adhesion, suggesting that aberrant expression of FOXN3‑AS2 may reflect underlying alterations in these pathways that contribute to tumor progression. In contrast, an independent study focused on medial temporal lobe epilepsy (MTLE) investigated differentially expressed lncRNAs—including those involved in transcriptional regulation and inflammatory signaling pathways—but did not report FOXN3‑AS2 among the highlighted transcripts."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " Together, these findings suggest that while lncRNAs broadly regulate important biological processes in diverse diseases, FOXN3‑AS2 specifically may serve as a prognostic indicator in lung adenocarcinoma by participating in regulatory networks that modulate cell adhesion and receptor signaling.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Jianliang Li, Xiaoping Yu, Qian Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Screening of important lncRNAs associated with the prognosis of lung adenocarcinoma, based on integrated bioinformatics analysis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Med Rep (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3892/mmr.2019.10061"}], "href": "https://doi.org/10.3892/mmr.2019.10061"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30896819"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30896819"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Song Qiao, Qi Xu, Lin Cheng, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Integrated analysis of differentially expressed lncRNAs in Medial Temporal Lobe Epilepsy."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Neuro Endocrinol Lett (2018)"}]}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30183206"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30183206"}]}]}]}
Synonyms PRO1768
NCBI Gene ID 29018
API
Download Associations
Predicted Functions View FOXN3-AS2's ARCHS4 Predicted Functions.
Co-expressed Genes View FOXN3-AS2's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View FOXN3-AS2's ARCHS4 Predicted Functions.

Functional Associations

FOXN3-AS2 has 609 functional associations with biological entities spanning 4 categories (disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 12 datasets.

Click the + buttons to view associations for FOXN3-AS2 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray tissue samples with high or low expression of FOXN3-AS2 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray dataset.
Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles tissues with high or low expression of FOXN3-AS2 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of FOXN3-AS2 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of FOXN3-AS2 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
GEO Signatures of Differentially Expressed Genes for Diseases disease perturbations changing expression of FOXN3-AS2 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of FOXN3-AS2 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Kinase Perturbations kinase perturbations changing expression of FOXN3-AS2 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of FOXN3-AS2 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of FOXN3-AS2 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of FOXN3-AS2 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
LINCS L1000 CMAP Chemical Perturbation Consensus Signatures small molecule perturbations changing expression of FOXN3-AS2 gene from the LINCS L1000 CMAP Chemical Perturbations Consensus Signatures dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of FOXN3-AS2 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.