| Name | GABPB1 antisense RNA 1 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n GABPB1‐AS1 is a long non‐coding RNA that appears to modulate diverse cellular processes—particularly in stress responses and cancer progression—by acting as a competing endogenous RNA (ceRNA) to regulate downstream oncogenic pathways. For example, in human induced pluripotent stem cells, GABPB1‐AS1 is one of several lncRNAs that rapidly respond to chemical stresses and may serve as a surrogate indicator of cellular stress responses."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In the human myometrium during term labor, it has been identified among key hubs within a regulatory network that includes transcription factors and other non‐coding RNAs, suggesting a role in the transformation of uterine cells."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n In the context of cancer, GABPB1‐AS1 is upregulated in multiple tumor types. In human papillomavirus 16‐positive cervical cancer, its elevated expression correlates with larger tumor size, lymph node metastasis, and advanced clinical stage. Functionally, GABPB1‐AS1 acts as a ceRNA by sponging miR‐519e‐5p, thereby de-repressing the oncogene Notch2 to promote cell proliferation and invasion."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": " Similarly, in primary Sjögren’s syndrome, higher levels of GABPB1‐AS1 are positively associated with B cell percentages and immunoglobulin G levels, indicating a potential role in immune regulation."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n Additional studies have implicated GABPB1‐AS1 as an oncogenic factor in several other malignancies. In osteosarcoma, its silencing has been shown to reduce cellular proliferation and migration."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": " In glioma, GABPB1‐AS1 promotes tumor growth and metastasis by competitively binding miR‐330, which in turn de-represses ZNF367 and activates cell cycle signaling pathways."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": " In pancreatic cancer, it is identified as one of the key lncRNAs associated with both tumor progression and patient survival, functioning within a broader ceRNA regulatory network."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": " Moreover, in cytogenetically normal acute myeloid leukemia, elevated GABPB1‐AS1 expression correlates with poorer overall survival and is being considered as a potential prognostic biomarker"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "8"}]}, {"type": "t", "text": ", and its differential expression has also been proposed as a marker for prostate cancer progression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "9"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n Collectively, these findings suggest that GABPB1‐AS1 plays multifaceted roles in both normal stress response and the pathogenesis of diverse diseases—primarily by acting as a ceRNA that modulates the expression of key regulatory genes, thereby impacting cell proliferation, invasion, immune modulation, and overall disease progression.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Hidenori Tani, Yasuko Onuma, Yuzuru Ito, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNAs as surrogate indicators for chemical stress responses in human-induced pluripotent stem cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0106282"}], "href": "https://doi.org/10.1371/journal.pone.0106282"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25171338"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25171338"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Sonika Tyagi, Eng-Cheng Chan, Daniel Barker, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Transcriptomic analysis reveals myometrial topologically associated domains linked to the onset of human term labour."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Hum Reprod (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/molehr/gaac003"}], "href": "https://doi.org/10.1093/molehr/gaac003"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35150271"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35150271"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Rongying Ou, Mingfen Lv, Xuan Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "HPV16 E6 oncoprotein-induced upregulation of lncRNA GABPB1-AS1 facilitates cervical cancer progression by regulating miR-519e-5p/Notch2 axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "FASEB J (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1096/fj.202000762R"}], "href": "https://doi.org/10.1096/fj.202000762R"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32844486"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32844486"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Xiaochan Chen, Qi Cheng, Yan Du, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Differential long non-coding RNA expression profile and function analysis in primary Sjogren's syndrome."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "BMC Immunol (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s12865-021-00439-3"}], "href": "https://doi.org/10.1186/s12865-021-00439-3"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34284720"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34284720"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Jingyang Chen, Meiru Bian, Lingxiao Pan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "GABPB1-AS1 Promotes the Development of Osteosarcoma by Targeting SP1 and Activating the Wnt/"}, {"type": "a", "children": [{"type": "t", "text": "i"}], "href": "i"}, {"type": "t", "text": "β"}, {"type": "a", "children": [{"type": "t", "text": "/i"}], "href": "/i"}, {"type": "t", "text": "-Catenin Pathway."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Oncol (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1155/2022/8468896"}], "href": "https://doi.org/10.1155/2022/8468896"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35342417"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35342417"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Xiulong Li, Hongfeng Wang "}, {"type": "b", "children": [{"type": "t", "text": "Long Non-Coding RNA GABPB1-AS1 Augments Malignancy of Glioma Cells by Sequestering MicroRNA-330 and Reinforcing the ZNF367/Cell Cycle Signaling Pathway."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Neuropsychiatr Dis Treat (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.2147/NDT.S305182"}], "href": "https://doi.org/10.2147/NDT.S305182"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34276213"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34276213"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Yuanbin Liu, Zhen Huo, Weishen Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Construction and integrated analysis of a lncRNA-associated competing endogenous RNA network reveal functional lncRNAs in pancreatic cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Transl Cancer Res (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.21037/tcr.2020.04.03"}], "href": "https://doi.org/10.21037/tcr.2020.04.03"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35117727"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35117727"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Tao Sun, Lin Dong, Yan Guo, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Revealing key lncRNAs in cytogenetically normal acute myeloid leukemia by reconstruction of the lncRNA-miRNA-mRNA network."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41598-022-08930-6"}], "href": "https://doi.org/10.1038/s41598-022-08930-6"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35322118"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35322118"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Abedalrhman Alkhateeb, Iman Rezaeian, Siva Singireddy, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Transcriptomics Signature from Next-Generation Sequencing Data Reveals New Transcriptomic Biomarkers Related to Prostate Cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Inform (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1177/1176935119835522"}], "href": "https://doi.org/10.1177/1176935119835522"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30890858"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30890858"}]}]}]}
|
| NCBI Gene ID | 100129387 |
| API | |
| Download Associations | |
| Predicted Functions |
![]() |
| Co-expressed Genes |
![]() |
| Expression in Tissues and Cell Lines |
![]() |
GABPB1-AS1 has 906 functional associations with biological entities spanning 4 categories (organism, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 14 datasets.
Click the + buttons to view associations for GABPB1-AS1 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of GABPB1-AS1 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset. | |
| Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of GABPB1-AS1 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of GABPB1-AS1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| CellMarker Gene-Cell Type Associations | cell types associated with GABPB1-AS1 gene from the CellMarker Gene-Cell Type Associations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of GABPB1-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Kinase Perturbations | kinase perturbations changing expression of GABPB1-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of GABPB1-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations | transcription factor perturbations changing expression of GABPB1-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Viral Infections | virus perturbations changing expression of GABPB1-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of GABPB1-AS1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of GABPB1-AS1 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of GABPB1-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles | cell lines with high or low expression of GABPB1-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset. | |
| Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles | cell types and tissues with high or low DNA methylation of GABPB1-AS1 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset. | |