| HGNC Family | Non-coding RNAs |
| Name | HOXD antisense growth-associated long non-coding RNA |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n HAGLR (also known as HOXD‐AS1) has emerged as a multifunctional long noncoding RNA implicated in a variety of pathological processes. In several cancer types, HAGLR exerts oncogenic functions by acting as a competing endogenous RNA that “sponges” tumor‐suppressive microRNAs, thereby de‐repressing targets involved in cell proliferation, migration, invasion, and epithelial–mesenchymal transition. For instance, in esophageal cancer HAGLR was found to promote cell proliferation, migration, and invasion through sequestering miR‑143‑5p to consequently upregulate LAMP3."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In non‐small cell lung cancer, elevated HAGLR levels were associated with enhanced fatty acid synthase expression and poorer clinical parameters, with silencing of HAGLR resulting in inhibition of cell growth and invasion."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " Conversely, in lung adenocarcinoma, reduced HAGLR expression was observed and correlated with shorter patient survival; mechanistic studies indicated that HAGLR can act in a tumor‐suppressive manner by recruiting DNMT1 to the E2F1 promoter and modulating DNA methylation."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": " Beyond the context of cancer, HAGLR plays a role in bone biology—its expression in osteoblasts supports cell viability and migration via a miR‑19a‑3p/TGFBR2 regulatory axis, thereby contributing to the healing process of femoral neck fractures."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": " In breast cancer cell models, nuclear HAGLR is negatively regulated by miR‑7704, and this interplay appears to influence tumor cell phenotypes."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": " Moreover, in hepatocellular carcinoma HAGLR is upregulated and promotes proliferation and metastasis by sequestering miR‑6785‑5p"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": ", while in thyroid cancer its expression is enhanced in an m6A‐dependent manner through regulation by IGF2BP2, further contributing to malignant progression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": " Finally, in dermatomyositis, elevated levels of HAGLR have been correlated with disease activity and are proposed to affect the differentiation of regulatory T cells via modulation of RUNX3‐mediated Foxp3 transcription."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "8"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Chengliang Yang, Sining Shen, Xiaoli Zheng, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long noncoding RNA HAGLR acts as a microRNA-143-5p sponge to regulate epithelial-mesenchymal transition and metastatic potential in esophageal cancer by regulating LAMP3."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "FASEB J (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1096/fj.201802543RR"}], "href": "https://doi.org/10.1096/fj.201802543RR"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31311326"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31311326"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Alexander Leyva, Tri Tran, Andrew T Cibulas, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Filler Migration and Granuloma Formation After Gluteal Augmentation with Free-silicone Injections."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cureus (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.7759/cureus.3294"}], "href": "https://doi.org/10.7759/cureus.3294"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30443464"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30443464"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Xiaobin Guo, Zhuochang Chen, Limin Zhao, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNA-HAGLR suppressed tumor growth of lung adenocarcinoma through epigenetically silencing E2F1."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Exp Cell Res (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.yexcr.2019.06.006"}], "href": "https://doi.org/10.1016/j.yexcr.2019.06.006"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31194977"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31194977"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "L-X Pan, W Ding "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA HAGLR accelerates femoral neck fracture healing through negatively regulating miRNA-19a-3p."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Eur Rev Med Pharmacol Sci (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.26355/eurrev_202004_20984"}], "href": "https://doi.org/10.26355/eurrev_202004_20984"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32373944"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32373944"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Shelly Mahlab-Aviv, Keren Zohar, Yael Cohen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Spliceosome-Associated microRNAs Signify Breast Cancer Cells and Portray Potential Novel Nuclear Targets."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Int J Mol Sci (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3390/ijms21218132"}], "href": "https://doi.org/10.3390/ijms21218132"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33143250"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33143250"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Y-H Li, G-M Huang, W Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA HAGLR exacerbates hepatocellular carcinoma through negatively regulating miR-6785-5p."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Eur Rev Med Pharmacol Sci (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.26355/eurrev_202009_23018"}], "href": "https://doi.org/10.26355/eurrev_202009_23018"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33015776"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33015776"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Liangpeng Dong, Zushi Geng, Zheng Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "IGF2BP2 knockdown suppresses thyroid cancer progression by reducing the expression of long non-coding RNA HAGLR."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Pathol Res Pract (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.prp.2021.153550"}], "href": "https://doi.org/10.1016/j.prp.2021.153550"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34340128"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34340128"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Wang Yan, Lulu Wang, Zhaoying Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Knockdown of lncRNA HAGLR promotes Treg cell differentiation through increasing the RUNX3 level in dermatomyositis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Mol Histol (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s10735-021-10051-9"}], "href": "https://doi.org/10.1007/s10735-021-10051-9"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35064420"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35064420"}]}]}]}
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| Synonyms | MDGT, HOXD-AS1 |
| NCBI Gene ID | 401022 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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HAGLR has 877 functional associations with biological entities spanning 4 categories (chemical, disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA) extracted from 17 datasets.
Click the + buttons to view associations for HAGLR from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of HAGLR gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset. | |
| Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of HAGLR gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of HAGLR gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| CCLE Cell Line Gene Expression Profiles | cell lines with high or low expression of HAGLR gene relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset. | |
| CellMarker Gene-Cell Type Associations | cell types associated with HAGLR gene from the CellMarker Gene-Cell Type Associations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of HAGLR gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Kinase Perturbations | kinase perturbations changing expression of HAGLR gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of HAGLR gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations | transcription factor perturbations changing expression of HAGLR gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of HAGLR gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of HAGLR gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| GTEx Tissue-Specific Aging Signatures | tissue samples with high or low expression of HAGLR gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset. | |
| GWASdb SNP-Disease Associations | diseases associated with HAGLR gene in GWAS and other genetic association datasets from the GWASdb SNP-Disease Associations dataset. | |
| GWASdb SNP-Phenotype Associations | phenotypes associated with HAGLR gene in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset. | |
| HuGE Navigator Gene-Phenotype Associations | phenotypes associated with HAGLR gene by text-mining GWAS publications from the HuGE Navigator Gene-Phenotype Associations dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of HAGLR gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| MPO Gene-Phenotype Associations | phenotypes of transgenic mice caused by HAGLR gene mutations from the MPO Gene-Phenotype Associations dataset. | |