HCG17 Gene

Name HLA complex group 17 (non-protein coding)
Synonyms LINC00046, HCG18, NCRNA00046
NCBI Gene ID 414778
API
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Predicted Functions View HCG17's ARCHS4 Predicted Functions.
Co-expressed Genes View HCG17's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View HCG17's ARCHS4 Predicted Functions.

Functional Associations

HCG17 has 610 functional associations with biological entities spanning 3 categories (functional term, phrase or reference, disease, phenotype or trait, cell line, cell type or tissue) extracted from 8 datasets.

Click the + buttons to view associations for HCG17 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq tissue samples with high or low expression of HCG17 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of HCG17 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of HCG17 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
GeneSigDB Published Gene Signatures PubMedIDs of publications reporting gene signatures containing HCG17 from the GeneSigDB Published Gene Signatures dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of HCG17 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of HCG17 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
GWAS Catalog SNP-Phenotype Associations phenotypes associated with HCG17 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations dataset.
Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles cell types and tissues with high or low DNA methylation of HCG17 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset.
Funding