HHIP-AS1 Gene

Name HHIP antisense RNA 1
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n HHIP‐AS1 is a long noncoding RNA that has emerged as an important regulator in a variety of biological contexts, particularly in cancer and tissue remodeling. In triple‐negative breast cancer cells, HHIP‐AS1 is directly regulated by the TGFβ/SMAD2/3 signaling pathway, as demonstrated by SMAD2/3 binding at its promoter (see."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In hepatocellular carcinoma, its expression is markedly reduced, and lower levels correlate with larger tumor size, metastasis, advanced TNM stage, and worse overall survival. Functionally, HHIP‐AS1 suppresses cell proliferation, migration, and invasion while promoting apoptosis by stabilizing HHIP mRNA via a HuR‐dependent mechanism."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n In lung cancer, HHIP‐AS1 expression is significantly diminished compared to normal tissue. Its overexpression inhibits epithelial–mesenchymal transition (EMT) and cellular stemness by sponging miR‑153‑3p, thereby modulating the expression of PCDHGA9."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": " Similarly, in head and neck squamous cell carcinoma, decreased expression of HHIP‐AS1, alongside that of HHIP, is associated with aberrant hedgehog pathway regulation and poorer survival outcomes."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n Beyond its functional roles in cancer progression, HHIP‐AS1 has also been identified as a prognostic biomarker. Its altered expression is included among panels in ovarian cancer prognostic models"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": ", and its downregulation under mechanical compressive forces in periodontal ligament stem cells suggests a role in bone remodeling during orthodontic tooth movement."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n Collectively, these findings indicate that HHIP‐AS1 functions as a context‐dependent regulator. In cancers such as hepatocellular carcinoma, lung cancer, and head and neck squamous cell carcinoma, it acts predominantly as a tumor suppressor by modulating key signaling pathways and maintaining proper regulation of hedgehog and TGFβ signaling. Moreover, its expression levels may serve as valuable prognostic indicators and therapeutic targets in cancer and potentially in regenerative medicine.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Radhakrishnan Vishnubalaji, Nehad M Alajez "}, {"type": "b", "children": [{"type": "t", "text": "Epigenetic regulation of triple negative breast cancer (TNBC) by TGF-β signaling."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41598-021-94514-9"}], "href": "https://doi.org/10.1038/s41598-021-94514-9"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34326372"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34326372"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Changwen Bo, Xiuli Li, Li He, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A novel long noncoding RNA HHIP-AS1 suppresses hepatocellular carcinoma progression through stabilizing HHIP mRNA."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Biophys Res Commun (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbrc.2019.09.137"}], "href": "https://doi.org/10.1016/j.bbrc.2019.09.137"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31604528"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31604528"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Jiaxiang Ye, Siyao Wu, Shan Pan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Risk scoring based on expression of long non‑coding RNAs can effectively predict survival in hepatocellular carcinoma patients with or without fibrosis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncol Rep (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3892/or.2020.7528"}], "href": "https://doi.org/10.3892/or.2020.7528"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32323856"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32323856"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Zhuanzhuan Zhou, Yanping Lai, Shan Cao, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long non‑coding RNA HHIP‑AS1 inhibits lung cancer epithelial‑mesenchymal transition and stemness by regulating PCDHGA9."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Med Rep (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3892/mmr.2021.12485"}], "href": "https://doi.org/10.3892/mmr.2021.12485"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34643245"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34643245"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Balarko Chakraborty, Mukta Basu, Debalina Mukhopadhyay, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Differential promoter usages of PTCH1 and down regulation of HHIP are associated with HNSCC progression."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Pathol Res Pract (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.prp.2022.153827"}], "href": "https://doi.org/10.1016/j.prp.2022.153827"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35276608"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35276608"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Na Li, Xianquan Zhan "}, {"type": "b", "children": [{"type": "t", "text": "Identification of clinical trait-related lncRNA and mRNA biomarkers with weighted gene co-expression network analysis as useful tool for personalized medicine in ovarian cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "EPMA J (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s13167-019-00175-0"}], "href": "https://doi.org/10.1007/s13167-019-00175-0"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31462944"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31462944"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Qianyi Qin, Haoqing Yang, Chen Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "lncRNA HHIP-AS1 Promotes the Osteogenic Differentiation Potential and Inhibits the Migration Ability of Periodontal Ligament Stem Cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Stem Cells Int (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1155/2021/5595580"}], "href": "https://doi.org/10.1155/2021/5595580"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34721591"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34721591"}]}]}]}
NCBI Gene ID 646576
API
Download Associations
Predicted Functions View HHIP-AS1's ARCHS4 Predicted Functions.
Co-expressed Genes View HHIP-AS1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View HHIP-AS1's ARCHS4 Predicted Functions.

Functional Associations

HHIP-AS1 has 850 functional associations with biological entities spanning 6 categories (organism, disease, phenotype or trait, chemical, functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 18 datasets.

Click the + buttons to view associations for HHIP-AS1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles tissues with high or low expression of HHIP-AS1 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset.
Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq tissue samples with high or low expression of HHIP-AS1 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset.
Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles tissues with high or low expression of HHIP-AS1 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of HHIP-AS1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
CellMarker Gene-Cell Type Associations cell types associated with HHIP-AS1 gene from the CellMarker Gene-Cell Type Associations dataset.
GEO Signatures of Differentially Expressed Genes for Diseases disease perturbations changing expression of HHIP-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of HHIP-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of HHIP-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations transcription factor perturbations changing expression of HHIP-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Viral Infections virus perturbations changing expression of HHIP-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of HHIP-AS1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of HHIP-AS1 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
GTEx Tissue-Specific Aging Signatures tissue samples with high or low expression of HHIP-AS1 gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset.
HuBMAP Azimuth Cell Type Annotations cell types associated with HHIP-AS1 gene from the HuBMAP Azimuth Cell Type Annotations dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of HHIP-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
LOCATE Predicted Protein Localization Annotations cellular components predicted to contain HHIP-AS1 protein from the LOCATE Predicted Protein Localization Annotations dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of HHIP-AS1 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles cell types and tissues with high or low DNA methylation of HHIP-AS1 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset.