| Name | HS1BP3 intronic transcript 1 |
| Summary |
{"type": "root", "children": [{"type": "t", "text": "<head>\n <meta charset=\"UTF-8\">\n <title>HS1BP3-IT1 Function Summary</title>\n </head>\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n In the abstract by Goldberger et al"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ", the primary focus is on identifying parent‐of‐origin effects on adiposity and glycemic traits – notably, a maternal‐specific association of a common variant in "}, {"type": "i", "children": [{"type": "t", "text": "APOB"}]}, {"type": "t", "text": " with body mass index, waist circumference, and glycemic measures. The study details regulatory annotations that point to tissue‐specific effects (with evidence of allelic‐specific methylation in liver), underscoring the role of epigenetic and regulatory mechanisms underlying cardio‐metabolic traits. However, within this abstract no direct mention or functional characterization of the lncRNA HS1BP3-IT1 is provided.\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Thus, while the study exemplifies how regulatory elements can influence metabolic traits, no functional insights into HS1BP3-IT1 are described. As a result, its role within the regulatory landscape affecting adiposity and glycemic traits remains to be elucidated based on the evidence provided in this abstract.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Hagit Hochner, Catherine Allard, Einat Granot-Hershkovitz, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Parent-of-Origin Effects of the APOB Gene on Adiposity in Young Adults."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS Genet (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pgen.1005573"}], "href": "https://doi.org/10.1371/journal.pgen.1005573"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26451733"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26451733"}]}]}]}
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| NCBI Gene ID | 100874343 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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HS1BP3-IT1 has 509 functional associations with biological entities spanning 3 categories (molecular profile, cell line, cell type or tissue, gene, protein or microRNA) extracted from 4 datasets.
Click the + buttons to view associations for HS1BP3-IT1 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| ChEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of HS1BP3-IT1 gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
| ChEA Transcription Factor Targets | transcription factors binding the promoter of HS1BP3-IT1 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of HS1BP3-IT1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of HS1BP3-IT1 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |