HSPB2-C11ORF52 Gene

Name HSPB2-C11orf52 readthrough (NMD candidate)
Description This locus represents naturally occurring read-through transcription between the neighboring heat shock 27kDa protein 2 (HSPB2) and chromosome 11 open reading frame 52 (C11orf52) genes. The read-through transcript is a candidate for nonsense-mediated mRNA decay (NMD) based on the use of the supported HSPB2 translational start codon, and it is therefore unlikely to produce a protein product. [provided by RefSeq, Dec 2010]
Synonyms HSPB2-C11orf52
NCBI Gene ID 100528019
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Predicted Functions View HSPB2-C11ORF52's ARCHS4 Predicted Functions.
Co-expressed Genes View HSPB2-C11ORF52's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View HSPB2-C11ORF52's ARCHS4 Predicted Functions.

Functional Associations

HSPB2-C11ORF52 has 627 functional associations with biological entities spanning 3 categories (molecular profile, cell line, cell type or tissue, gene, protein or microRNA) extracted from 12 datasets.

Click the + buttons to view associations for HSPB2-C11ORF52 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of HSPB2-C11ORF52 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
CellMarker Gene-Cell Type Associations cell types associated with HSPB2-C11ORF52 gene from the CellMarker Gene-Cell Type Associations dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of HSPB2-C11ORF52 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at HSPB2-C11ORF52 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of HSPB2-C11ORF52 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of HSPB2-C11ORF52 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
HPA Tissue Gene Expression Profiles tissues with high or low expression of HSPB2-C11ORF52 gene relative to other tissues from the HPA Tissue Gene Expression Profiles dataset.
HPA Tissue Sample Gene Expression Profiles tissue samples with high or low expression of HSPB2-C11ORF52 gene relative to other tissue samples from the HPA Tissue Sample Gene Expression Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of HSPB2-C11ORF52 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of HSPB2-C11ORF52 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles cell types and tissues with high or low DNA methylation of HSPB2-C11ORF52 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at HSPB2-C11ORF52 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.