HYCC1 Gene

Name hyccin PI4KA lipid kinase complex subunit 1
Description The protein encoded by this gene may play a part in the beta-catenin/Lef signaling pathway. Expression of this gene is down-regulated by beta-catenin. Defects in this gene are a cause of hypomyelination with congenital cataract (HCC). [provided by RefSeq, Oct 2008]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nFAM126A, also known as hyccin or HYCC1, is a membrane protein that plays a critical role in myelin formation and maintenance. It functions as an intrinsic component of the plasma membrane phosphatidylinositol 4‐kinase complex—composed of PI4KIIIα and adaptor proteins such as TTC7 and EFR3—to regulate the synthesis of phosphatidylinositol 4‐phosphate (PtdIns(4)P). The generation of this lipid is essential for establishing plasma membrane identity and supporting the massive membrane expansion required in myelinating cells. Reduced PtdIns(4)P production resulting from FAM126A deficiency has been directly linked to the pathogenesis of hypomyelination and congenital cataract (HCC), a leukodystrophy characterized by central and peripheral myelin deficits and early-onset cataracts."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "4"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nMutations in FAM126A—including deletions, splice-site changes, and missense variants—compromise the normal function of hyccin. Several studies have demonstrated that mutations can lead to protein deficiency or misfolding, with some missense changes prompting hyccin to aggregate in intracellular compartments such as the endoplasmic reticulum. This aberrant localization is thought to trigger kinase activities associated with the unfolded protein response, thereby exacerbating cellular stress. Clinically, the degree of residual protein function appears to influence the severity of the HCC phenotype, ranging from classical presentations with severe myelin deficiency and congenital cataract to milder forms with limited peripheral nerve involvement."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "5", "end_ref": "7"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn addition to its indispensable role in myelination, hyccin is emerging as a key player in other aspects of neuronal function. In Drosophila models, modulation of the hyccin-containing PI4K complex has been shown to influence neuronal amyloid‑β accumulation, synaptic function, and motor behavior—findings that extend hyccin’s impact to neurodegenerative processes, including those relevant to Alzheimer’s disease. These results suggest that the proper regulation of plasma membrane phosphoinositide levels by hyccin is crucial not only for myelin maintenance but also for broader aspects of neuronal integrity."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "8"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nMoreover, recent evidence points to additional regulatory roles for the FAM126A gene product in non‐neuronal contexts. A circular RNA isoform derived from FAM126A, termed circFAM126A, has been implicated in non‑small cell lung cancer. This circRNA functions as a molecular sponge for miR‑613, thereby modulating the expression of IRS2 and affecting cell proliferation, migration, invasion, apoptosis, and cell cycle progression. Such findings underscore the multifaceted biological implications of FAM126A and hint at its potential contributions to diverse pathologies beyond congenital hypomyelinating disorders."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "9"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Jeremy M Baskin, Xudong Wu, Romain Christiano, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The leukodystrophy protein FAM126A (hyccin) regulates PtdIns(4)P synthesis at the plasma membrane."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Cell Biol (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/ncb3271"}], "href": "https://doi.org/10.1038/ncb3271"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26571211"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26571211"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Federico Zara, Roberta Biancheri, Claudio Bruno, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Deficiency of hyccin, a newly identified membrane protein, causes hypomyelination and congenital cataract."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Genet (2006)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/ng1870"}], "href": "https://doi.org/10.1038/ng1870"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16951682"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16951682"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Roberta Biancheri, Federico Zara, Andrea Rossi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Hypomyelination and congenital cataract: broadening the clinical phenotype."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Arch Neurol (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1001/archneurol.2011.201"}], "href": "https://doi.org/10.1001/archneurol.2011.201"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21911699"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21911699"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Monica Traverso, Ozge Ozalp Yuregir, Aviva Mimouni-Bloch, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Hypomyelination and congenital cataract: identification of novel mutations in two unrelated families."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Eur J Paediatr Neurol (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.ejpn.2012.06.004"}], "href": "https://doi.org/10.1016/j.ejpn.2012.06.004"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22749724"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22749724"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Yuki Miyamoto, Tomohiro Torii, Takahiro Eguchi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Hypomyelinating leukodystrophy-associated missense mutant of FAM126A/hyccin/DRCTNNB1A aggregates in the endoplasmic reticulum."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Clin Neurosci (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.jocn.2013.09.014"}], "href": "https://doi.org/10.1016/j.jocn.2013.09.014"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24417797"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24417797"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Sibel Aylin Ugur, Aslihan Tolun "}, {"type": "b", "children": [{"type": "t", "text": "A deletion in DRCTNNB1A associated with hypomyelination and juvenile onset cataract."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Eur J Hum Genet (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/sj.ejhg.5201935"}], "href": "https://doi.org/10.1038/sj.ejhg.5201935"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17928815"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17928815"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "M Traverso, S Assereto, E Gazzerro, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Novel FAM126A mutations in hypomyelination and congenital cataract disease."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Biophys Res Commun (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbrc.2013.08.077"}], "href": "https://doi.org/10.1016/j.bbrc.2013.08.077"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23998934"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23998934"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Minghao Sun, Yinghui Zhao, Men Han, et al. "}, {"type": "b", "children": [{"type": "t", "text": "TTC7 and Hyccin Regulate Neuronal Aβ42 Accumulation and its Associated Neural Deficits in Aβ42-Expressing Drosophila."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Alzheimers Dis (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3233/JAD-170907"}], "href": "https://doi.org/10.3233/JAD-170907"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30103315"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30103315"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Yujing Wang, Dehui Ai, Shaoxiong Li "}, {"type": "b", "children": [{"type": "t", "text": "CirRNA circFAM126A Exerts Oncogenic Functions in NSCLC to Upregulate IRS2."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Genet (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s10528-022-10212-9"}], "href": "https://doi.org/10.1007/s10528-022-10212-9"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35397054"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35397054"}]}]}]}
NCBI Gene ID 84668
API
Download Associations
Predicted Functions View HYCC1's ARCHS4 Predicted Functions.
Co-expressed Genes View HYCC1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View HYCC1's ARCHS4 Predicted Functions.

Functional Associations

HYCC1 has 2,271 functional associations with biological entities spanning 6 categories (disease, phenotype or trait, functional term, phrase or reference, chemical, cell line, cell type or tissue, gene, protein or microRNA, sequence feature) extracted from 26 datasets.

Click the + buttons to view associations for HYCC1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles tissue samples with high or low expression of HYCC1 gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset.
CellMarker Gene-Cell Type Associations cell types associated with HYCC1 gene from the CellMarker Gene-Cell Type Associations dataset.
ClinVar Gene-Phenotype Associations 2025 phenotypes associated with HYCC1 gene from the curated ClinVar Gene-Phenotype Associations 2025 dataset.
CM4AI KOLF21J CRISPRi Gene Perturbation Atlas gene perturbations changing expression of HYCC1 gene from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas dataset.
COMPARTMENTS Experimental Protein Localization Evidence Scores 2025 cellular components containing HYCC1 protein in low- or high-throughput protein localization assays from the COMPARTMENTS Experimental Protein Localization Evidence Scores 2025 dataset.
COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 cellular components co-occuring with HYCC1 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset.
GO Biological Process Annotations 2025 biological processes involving HYCC1 gene from the curated GO Biological Process Annotations2025 dataset.
GTEx eQTL 2025 SNPs regulating expression of HYCC1 gene from the GTEx eQTL 2025 dataset.
GTEx Tissue Gene Expression Profiles 2023 tissues with high or low expression of HYCC1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset.
GTEx Tissue-Specific Aging Signatures tissue samples with high or low expression of HYCC1 gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset.
GWAS Catalog SNP-Phenotype Associations 2025 phenotypes associated with HYCC1 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset.
IMPC Knockout Mouse Phenotypes phenotypes of mice caused by HYCC1 gene knockout from the IMPC Knockout Mouse Phenotypes dataset.
JASPAR Predicted Human Transcription Factor Targets 2025 transcription factors regulating expression of HYCC1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset.
JASPAR Predicted Mouse Transcription Factor Targets 2025 transcription factors regulating expression of HYCC1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset.
Kinase Library Tyrosine Kinome Atlas kinases that phosphorylate HYCC1 protein from the Kinase Library Tyrosine Kinome Atlas dataset.
MoTrPAC Rat Endurance Exercise Training tissue samples with high or low expression of HYCC1 gene relative to other tissue samples from the MoTrPAC Rat Endurance Exercise Training dataset.
Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures gene perturbations changing expression of HYCC1 gene from the Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures dataset.
Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures gene perturbations changing expression of HYCC1 gene from the Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures dataset.
Rummagene Transcription Factor Associations 2026 transcription factors regulating expression of HYCC1 gene from the Rummagene Transcription Factor Associations 2026 dataset.
RummaGEO Drug Perturbation Signatures drug perturbations changing expression of HYCC1 gene from the RummaGEO Drug Perturbation Signatures dataset.
RummaGEO Gene Perturbation Signatures gene perturbations changing expression of HYCC1 gene from the RummaGEO Gene Perturbation Signatures dataset.
Sci-Plex Drug Perturbation Signatures drug perturbations changing expression of HYCC1 gene from the Sci-Plex Drug Perturbation Signatures dataset.
Tahoe Therapeutics Tahoe 100M Perturbation Atlas drug perturbations changing expression of HYCC1 gene from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.
TISSUES Curated Tissue Protein Expression Evidence Scores 2025 tissues with high expression of HYCC1 protein from the TISSUES Curated Tissue Protein Expression Evidence Scores 2025 dataset.
TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 tissues with high expression of HYCC1 protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 dataset.
TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 tissues co-occuring with HYCC1 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset.