IBA57-AS1 Gene

Name IBA57 antisense RNA 1 (head to head)
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n IBA57‐AS1 is an antisense long noncoding RNA that is implicated in the regulation of gene expression through mechanisms that include epistatic interactions and isoform‐specific modulation. Although its precise biological role requires further elucidation, emerging analytical tools are beginning to shed light on its function within complex regulatory networks. A recently developed nonlinear functional regression model for epistasis analysis enables the integration of RNA‐seq data with whole genome sequencing to capture detailed position‐level read count patterns, splicing variability, and transcriptional initiation differences (1). This innovative framework not only overcomes traditional limitations in summarizing gene expression with a single number but also provides enhanced power to detect gene–gene interactions by simultaneously analyzing all single nucleotide polymorphism (SNP) pairs within two genomic regions. By offering a finer resolution of isoform and position‐dependent information, the approach presents a promising strategy to uncover the potential regulatory roles of noncoding RNAs such as IBA57‐AS1, which may contribute to the modulation of transcriptomic complexity and genetic architecture underlying gene expression."}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ""}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Kelin Xu, Li Jin, Momiao Xiong "}, {"type": "b", "children": [{"type": "t", "text": "Functional regression method for whole genome eQTL epistasis analysis with sequencing data."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "BMC Genomics (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s12864-017-3777-4"}], "href": "https://doi.org/10.1186/s12864-017-3777-4"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28521784"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28521784"}]}]}]}
Synonyms C1ORF148, IBA57-DT
Proteins IBAS1_HUMAN
NCBI Gene ID 574432
API
Download Associations
Predicted Functions View IBA57-AS1's ARCHS4 Predicted Functions.
Co-expressed Genes View IBA57-AS1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View IBA57-AS1's ARCHS4 Predicted Functions.

Functional Associations

IBA57-AS1 has 594 functional associations with biological entities spanning 3 categories (functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 11 datasets.

Click the + buttons to view associations for IBA57-AS1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq tissue samples with high or low expression of IBA57-AS1 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset.
GeneSigDB Published Gene Signatures PubMedIDs of publications reporting gene signatures containing IBA57-AS1 from the GeneSigDB Published Gene Signatures dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of IBA57-AS1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of IBA57-AS1 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
HPA Cell Line Gene Expression Profiles cell lines with high or low expression of IBA57-AS1 gene relative to other cell lines from the HPA Cell Line Gene Expression Profiles dataset.
HPA Tissue Gene Expression Profiles tissues with high or low expression of IBA57-AS1 gene relative to other tissues from the HPA Tissue Gene Expression Profiles dataset.
HPA Tissue Protein Expression Profiles tissues with high or low expression of IBA57-AS1 protein relative to other tissues from the HPA Tissue Protein Expression Profiles dataset.
HPA Tissue Sample Gene Expression Profiles tissue samples with high or low expression of IBA57-AS1 gene relative to other tissue samples from the HPA Tissue Sample Gene Expression Profiles dataset.
LOCATE Predicted Protein Localization Annotations cellular components predicted to contain IBA57-AS1 protein from the LOCATE Predicted Protein Localization Annotations dataset.
MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations gene perturbations changing expression of IBA57-AS1 gene from the MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations dataset.
Roadmap Epigenomics Cell and Tissue Gene Expression Profiles cell types and tissues with high or low expression of IBA57-AS1 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue Gene Expression Profiles dataset.