IDH1-AS1 Gene

Name IDH1 antisense RNA 1
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n IDH1‐AS1 is a long noncoding RNA that has emerged as a context‐dependent regulator of cancer cell metabolism and proliferation. In prostate cancer, IDH1‐AS1 is upregulated via activation by transcription factors such as PAX5, and it promotes tumor growth by enhancing autophagy. Mechanistically, it stabilizes the mRNA of ATG5—either through direct post‐transcriptional regulation or by sequestering specific microRNAs like miR‐216b‐5p—resulting in increased autophagy that supports cell proliferation and survival."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n In contrast, in glioma, IDH1‐AS1 is downregulated, and its forced overexpression impedes cell cycle progression and cell proliferation while promoting apoptosis. Notably, although IDH1‐AS1 does not change IDH1 protein levels in glioma cells, it modifies the enzyme’s activity, suggesting that its tumor‐suppressive effects may be mediated through alterations in cellular metabolism."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Further highlighting its role in metabolic regulation, studies have demonstrated that under normoxic conditions the oncogene c‐Myc transcriptionally represses IDH1‐AS1. When expressed, IDH1‐AS1 promotes the homodimerization of IDH1, leading to enhanced enzymatic activity, increased production of α‐ketoglutarate, reduced reactive oxygen species, and subsequent downregulation of HIF1α. This cascade results in attenuation of glycolysis (the Warburg effect) and suppression of cell proliferation, establishing IDH1‐AS1 as a potential metabolic checkpoint in tumorigenesis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Collectively, these findings indicate that IDH1‐AS1 functions as a dual‐edged regulator in cancer: it promotes tumor growth in prostate cancer by stimulating autophagy, whereas in glioma and in the context of c‐Myc–mediated metabolic regulation, its expression appears to limit tumor progression. As such, IDH1‐AS1 may serve not only as a biomarker but also as a promising therapeutic target for modulating cancer metabolism and growth.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Nan Zhang, Zhongyi Li, Fuding Bai, et al. "}, {"type": "b", "children": [{"type": "t", "text": "PAX5-induced upregulation of IDH1-AS1 promotes tumor growth in prostate cancer by regulating ATG5-mediated autophagy."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Death Dis (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41419-019-1932-3"}], "href": "https://doi.org/10.1038/s41419-019-1932-3"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31570703"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31570703"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Shuo Wu, Liucheng Ding, Hewei Xu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The Long Non-Coding RNA "}, {"type": "a", "children": [{"type": "t", "text": "i"}], "href": "i"}, {"type": "t", "text": "IDH1-AS1"}, {"type": "a", "children": [{"type": "t", "text": "/i"}], "href": "/i"}, {"type": "t", "text": " Promotes Prostate Cancer Progression by Enhancing IDH1 Enzyme Activity."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Onco Targets Ther (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.2147/OTT.S251915"}], "href": "https://doi.org/10.2147/OTT.S251915"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32884284"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32884284"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Jubo Wang, Yu Quan, Jian Lv, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA IDH1-AS1 suppresses cell proliferation and tumor growth in glioma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Cell Biol (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1139/bcb-2019-0465"}], "href": "https://doi.org/10.1139/bcb-2019-0465"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32990028"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32990028"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Shaoxun Xiang, Hao Gu, Lei Jin, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA IDH1-AS1 links the functions of c-Myc and HIF1α via IDH1 to regulate the Warburg effect."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.1711257115"}], "href": "https://doi.org/10.1073/pnas.1711257115"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29378948"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29378948"}]}]}]}
NCBI Gene ID 100507475
API
Download Associations
Predicted Functions View IDH1-AS1's ARCHS4 Predicted Functions.
Co-expressed Genes View IDH1-AS1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View IDH1-AS1's ARCHS4 Predicted Functions.

Functional Associations

IDH1-AS1 has 779 functional associations with biological entities spanning 4 categories (organism, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 12 datasets.

Click the + buttons to view associations for IDH1-AS1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of IDH1-AS1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
CCLE Cell Line Gene Expression Profiles cell lines with high or low expression of IDH1-AS1 gene relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of IDH1-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Kinase Perturbations kinase perturbations changing expression of IDH1-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of IDH1-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GEO Signatures of Differentially Expressed Genes for Viral Infections virus perturbations changing expression of IDH1-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of IDH1-AS1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of IDH1-AS1 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of IDH1-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles cell lines with high or low expression of IDH1-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of IDH1-AS1 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles cell types and tissues with high or low DNA methylation of IDH1-AS1 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset.