| Name | interactor of HORMAD1 1 |
| Description | Predicted to be involved in several processes, including meiosis I cell cycle process; regulation of homologous chromosome segregation; and spermatogenesis. Predicted to be located in chromosome. Predicted to be active in condensed nuclear chromosome. [provided by Alliance of Genome Resources, Mar 2025] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n IHO1 functions as a key facilitator of programmed DNA double‐strand break (DSB) formation during meiosis by serving as an essential anchor for the assembly of pre‐DSB “recombinosomes.” In mouse meiocytes, IHO1 is recruited to the unsynapsed regions of the chromosome axis through its interaction with HORMAD1, thereby ensuring that SPO11 and its auxiliary proteins (including MEI4 and REC114) are efficiently assembled at sites where DSBs must occur to promote homolog pairing and subsequent crossover formation."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " Moreover, IHO1 interacts with other factors such as CXXC1—a homolog of the yeast histone methyl reader Spp1—that likely bridge activated recombination hotspots with the chromosome axis, underscoring a conserved mechanism in linking local chromatin modifications to the DSB machinery."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " Axis-associated cohesin components, such as STAG3 and REC8, further promote the proper localization of IHO1 together with HORMAD1 and MEI4, thus contributing to the spatial regulation of SPO11 activity along the axes."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": " Finally, dynamic regulation of IHO1, including its depletion from synapsed chromosome axes mediated by DNA damage response kinases like ATR, constitutes a negative feedback loop that restricts DSB numbers to appropriate levels during meiotic prophase."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Marcello Stanzione, Marek Baumann, Frantzeskos Papanikos, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Meiotic DNA break formation requires the unsynapsed chromosome axis-binding protein IHO1 (CCDC36) in mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Cell Biol (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/ncb3417"}], "href": "https://doi.org/10.1038/ncb3417"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27723721"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27723721"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Yukiko Imai, Frédéric Baudat, Miguel Taillepierre, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The PRDM9 KRAB domain is required for meiosis and involved in protein interactions."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Chromosoma (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s00412-017-0631-z"}], "href": "https://doi.org/10.1007/s00412-017-0631-z"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28527011"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28527011"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Tanmoy Bhattacharyya, Michael Walker, Natalie R Powers, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Prdm9 and Meiotic Cohesin Proteins Cooperatively Promote DNA Double-Strand Break Formation in Mammalian Spermatocytes."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Curr Biol (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.cub.2019.02.007"}], "href": "https://doi.org/10.1016/j.cub.2019.02.007"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30853435"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30853435"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Ihsan Dereli, Marcello Stanzione, Fabrizio Olmeda, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Four-pronged negative feedback of DSB machinery in meiotic DNA-break control in mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nucleic Acids Res (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/nar/gkab082"}], "href": "https://doi.org/10.1093/nar/gkab082"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33619545"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33619545"}]}]}]}
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| NCBI Gene ID | 339834 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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IHO1 has 1,275 functional associations with biological entities spanning 6 categories (functional term, phrase or reference, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA, sequence feature) extracted from 20 datasets.
Click the + buttons to view associations for IHO1 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of IHO1 gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset. | |
| CellMarker Gene-Cell Type Associations | cell types associated with IHO1 gene from the CellMarker Gene-Cell Type Associations dataset. | |
| CM4AI KOLF21J CRISPRi Gene Perturbation Atlas | gene perturbations changing expression of IHO1 gene from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas dataset. | |
| COMPARTMENTS Curated Protein Localization Evidence Scores 2025 | cellular components containing IHO1 protein from the COMPARTMENTS Curated Protein Localization Evidence Scores 2025 dataset. | |
| COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 | cellular components co-occuring with IHO1 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset. | |
| GO Biological Process Annotations 2025 | biological processes involving IHO1 gene from the curated GO Biological Process Annotations2025 dataset. | |
| GO Cellular Component Annotations 2025 | cellular components containing IHO1 protein from the curated GO Cellular Component Annotations 2025 dataset. | |
| GTEx eQTL 2025 | SNPs regulating expression of IHO1 gene from the GTEx eQTL 2025 dataset. | |
| GTEx Tissue Gene Expression Profiles 2023 | tissues with high or low expression of IHO1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset. | |
| GWAS Catalog SNP-Phenotype Associations 2025 | phenotypes associated with IHO1 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset. | |
| JASPAR Predicted Human Transcription Factor Targets 2025 | transcription factors regulating expression of IHO1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset. | |
| JASPAR Predicted Mouse Transcription Factor Targets 2025 | transcription factors regulating expression of IHO1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset. | |
| PFOCR Pathway Figure Associations 2024 | pathways involving IHO1 protein from the Wikipathways PFOCR 2024 dataset. | |
| Rummagene Transcription Factor Associations 2026 | transcription factors regulating expression of IHO1 gene from the Rummagene Transcription Factor Associations 2026 dataset. | |
| RummaGEO Drug Perturbation Signatures | drug perturbations changing expression of IHO1 gene from the RummaGEO Drug Perturbation Signatures dataset. | |
| RummaGEO Gene Perturbation Signatures | gene perturbations changing expression of IHO1 gene from the RummaGEO Gene Perturbation Signatures dataset. | |
| TISSUES Curated Tissue Protein Expression Evidence Scores 2025 | tissues with high expression of IHO1 protein from the TISSUES Curated Tissue Protein Expression Evidence Scores 2025 dataset. | |
| TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 | tissues with high expression of IHO1 protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 dataset. | |
| TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 | tissues co-occuring with IHO1 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset. | |
| WikiPathways Pathways 2024 | pathways involving IHO1 protein from the WikiPathways Pathways 2024 dataset. | |