| Name | ILF3 antisense RNA 1 (head to head) |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n ILF3‐AS1 is a long non‐coding RNA with context‐dependent functions that have been implicated in a wide range of human diseases, particularly in cancer. In several malignancies – including melanoma, osteosarcoma, hepatocellular carcinoma, retinoblastoma, nasopharyngeal carcinoma, gastric cancer, colorectal cancer, breast cancer, papillary thyroid carcinoma and colon adenocarcinoma – ILF3‐AS1 is frequently upregulated and functions as an oncogenic driver by promoting cell proliferation, migration, invasion and by inhibiting apoptosis."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "11"}]}, {"type": "t", "text": " In many of these studies, ILF3‐AS1 has been shown to promote oncogenic processes through multiple mechanisms. It interacts with regulatory proteins – such as recruiting or stabilizing epigenetic modifiers like EZH2 and binding to ILF3 to enhance transcript stability – and also functions as a competing endogenous RNA (ceRNA) that sponges diverse microRNAs (including miR‐212, miR‐132‐3p, miR‐320a, miR‐454‐3p, miR‐29a, miR‐4429, miR‐628‐5p, miR‐493‐5p, miR‐4306 and miR‐619‐5p) to modulate downstream targets such as SOX5, SMAD2, BMI1, PTEN, PTBP3, RAB14, MEIS2, PDK1 and CAMK1D."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "12"}, {"type": "fg_f", "ref": "2"}, {"type": "fg_f", "ref": "4"}, {"type": "fg_fs", "start_ref": "13", "end_ref": "15"}, {"type": "fg_f", "ref": "8"}, {"type": "fg_f", "ref": "16"}, {"type": "fg_f", "ref": "10"}]}, {"type": "t", "text": " In contrast, in certain contexts—such as in cervical cancer and myocardial infarction—ILF3‐AS1 appears to exert tumor‐suppressive or protective roles by inhibiting epithelial–mesenchymal transition and alleviating hypoxia‐induced injury via activation of the PI3K/Akt pathway."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "13"}, {"type": "fg_fs", "start_ref": "17", "end_ref": "19"}]}, {"type": "t", "text": " Furthermore, ILF3‐AS1 has been incorporated into prognostic signatures that effectively stratify patients with colon and cervical cancers according to recurrence and overall survival risk."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "20"}, {"type": "fg_f", "ref": "18"}]}, {"type": "t", "text": " Collectively, these findings demonstrate that ILF3‐AS1 is a critical regulator of tumorigenesis and cellular homeostasis whose mechanisms—including modulation of protein partners and microRNA networks—are highly context dependent, indicating its potential utility as both a therapeutic target and a prognostic biomarker.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Xiangjun Chen, Sha Liu, Xiaochun Zhao, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "SP1-mediated upregulation of lncRNA ILF3-AS1 functions a ceRNA for miR-212 to contribute to osteosarcoma progression via modulation of SOX5."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Biophys Res Commun (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbrc.2019.02.110"}], "href": "https://doi.org/10.1016/j.bbrc.2019.02.110"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30819403"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30819403"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Changwen Bo, Na Li, Li He, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "ILF3-AS1 promotes cell proliferation and inhibits cell apoptosis of breast cancer by binding with miR-4429 to upregulate RAB14."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Exp Toxicol (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1177/0960327121989422"}], "href": "https://doi.org/10.1177/0960327121989422"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33525948"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33525948"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Sen Hong, Shiquan Li, Miaomiao Bi, et al. 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| Synonyms | ILF3-DT |
| NCBI Gene ID | 147727 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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ILF3-AS1 has 941 functional associations with biological entities spanning 4 categories (organism, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 15 datasets.
Click the + buttons to view associations for ILF3-AS1 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of ILF3-AS1 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset. | |
| Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray | tissue samples with high or low expression of ILF3-AS1 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray dataset. | |
| Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of ILF3-AS1 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of ILF3-AS1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of ILF3-AS1 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of ILF3-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Kinase Perturbations | kinase perturbations changing expression of ILF3-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of ILF3-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations | transcription factor perturbations changing expression of ILF3-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Viral Infections | virus perturbations changing expression of ILF3-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of ILF3-AS1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of ILF3-AS1 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of ILF3-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles | cell lines with high or low expression of ILF3-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of ILF3-AS1 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |