ILRUN Gene

Name inflammation and lipid regulator with UBA-like and NBR1-like domains
Description This gene encodes a protein with N-terminal ubiquitin-associated (UBA)-like and central neighbor of BRCA1 gene 1 (NBR1)-like domains. The protein acts an inhibitor of antiviral and proinflammatory cytokine transcription and as a regulator of the renin-angiotensin-aldosterone system (RAAS). [provided by RefSeq, Jul 2021]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n ILRUN (inflammation and lipid regulator with UBA‐like and NBR1‐like domains, formerly known as C6orf106) is a highly conserved protein that plays multifaceted roles in human physiology. At the molecular level, ILRUN is best characterized as a negative regulator of innate immunity. It inhibits the transcription of key antiviral and proinflammatory cytokines – including type‐I interferons (IFN‐α/β) and tumor necrosis factor α (TNFα) – by interacting with interferon regulatory factor 3 (IRF3) and impairing its recruitment to type‐I IFN promoter sequences, in addition to reducing the nuclear levels of important coactivators such as p300 and CBP. Both its UBA‐like and NBR1‐like domains are essential for this inhibitory function, with the crystal structure of the NBR1‐like domain providing further insight into its molecular architecture and potential mechanisms of action."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Beyond its role in modulating the antiviral inflammatory response, genetic studies have linked ILRUN to metabolic regulation. Variants in or near ILRUN (C6orf106) have been associated with alterations in body mass index (BMI) and longitudinal changes in lipid traits, suggesting that ILRUN may contribute to the regulation of lipid metabolism and obesity‐related phenotypes."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "3", "end_ref": "5"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n In addition, aberrant expression of ILRUN has been implicated in tumorigenesis. Elevated levels of ILRUN (C6orf106) have been observed in several cancers – including invasive breast cancer, non‐small cell lung cancer, and pancreatic cancer – where its overexpression is correlated with enhanced proliferation and invasion, as well as with markers of epithelial‐mesenchymal transition. These findings point to a potential oncogenic role for ILRUN in promoting tumor progression."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "6", "end_ref": "8"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Overall, ILRUN functions as an important modulator balancing antiviral and inflammatory responses while also being linked to metabolic regulation and cancer progression. Additional studies into ILRUN’s biochemical interactions and regulatory networks will be critical for understanding its roles in health and disease.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Rebecca L Ambrose, Aaron M Brice, Alessandro T Caputo, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Molecular characterisation of ILRUN, a novel inhibitor of proinflammatory and antimicrobial cytokines."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Heliyon (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.heliyon.2020.e04115"}], "href": "https://doi.org/10.1016/j.heliyon.2020.e04115"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32518853"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32518853"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Rebecca L Ambrose, Yu Chih Liu, Timothy E Adams, et al. "}, {"type": "b", "children": [{"type": "t", "text": "C6orf106 is a novel inhibitor of the interferon-regulatory factor 3-dependent innate antiviral response."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.RA117.001491"}], "href": "https://doi.org/10.1074/jbc.RA117.001491"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29802199"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29802199"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "S Ahmad, A Poveda, D Shungin, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Established BMI-associated genetic variants and their prospective associations with BMI and other cardiometabolic traits: the GLACIER Study."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Int J Obes (Lond) (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/ijo.2016.72"}], "href": "https://doi.org/10.1038/ijo.2016.72"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27121252"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27121252"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Thomas J Baranski, Aldi T Kraja, Jill L Fink, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A high throughput, functional screen of human Body Mass Index GWAS loci using tissue-specific RNAi Drosophila melanogaster crosses."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS Genet (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pgen.1007222"}], "href": "https://doi.org/10.1371/journal.pgen.1007222"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29608557"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29608557"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Shafqat Ahmad, Wei Zhao, Frida Renström, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Physical activity, smoking, and genetic predisposition to obesity in people from Pakistan: the PROMIS study."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "BMC Med Genet (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s12881-015-0259-x"}], "href": "https://doi.org/10.1186/s12881-015-0259-x"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26683835"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26683835"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Guiyang Jiang, Xiupeng Zhang, Yong Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A novel biomarker C6orf106 promotes the malignant progression of breast cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Tumour Biol (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s13277-015-3500-5"}], "href": "https://doi.org/10.1007/s13277-015-3500-5"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25953261"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25953261"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Xiupeng Zhang, Yuan Miao, Xinmiao Yu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "C6orf106 enhances NSCLC cell invasion by upregulating vimentin, and downregulating E-cadherin and P120ctn."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Tumour Biol (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s13277-015-3274-9"}], "href": "https://doi.org/10.1007/s13277-015-3274-9"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25736925"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25736925"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Xin Li, Ming Dong, Jianping Zhou, et al. "}, {"type": "b", "children": [{"type": "t", "text": "C6orf106 accelerates pancreatic cancer cell invasion and proliferation via activating ERK signaling pathway."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell Biochem (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s11010-018-3455-0"}], "href": "https://doi.org/10.1007/s11010-018-3455-0"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30311108"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30311108"}]}]}]}
NCBI Gene ID 64771
API
Download Associations
Predicted Functions View ILRUN's ARCHS4 Predicted Functions.
Co-expressed Genes View ILRUN's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View ILRUN's ARCHS4 Predicted Functions.

Functional Associations

ILRUN has 2,777 functional associations with biological entities spanning 6 categories (chemical, functional term, phrase or reference, disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA, sequence feature) extracted from 42 datasets.

Click the + buttons to view associations for ILRUN from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles tissue samples with high or low expression of ILRUN gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset.
Carcinogenome Chemical Perturbation Carcinogenicity Signatures small molecule perturbations changing expression of ILRUN gene from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.
CCLE Cell Line Proteomics Cell lines associated with ILRUN protein from the CCLE Cell Line Proteomics dataset.
CellMarker Gene-Cell Type Associations cell types associated with ILRUN gene from the CellMarker Gene-Cell Type Associations dataset.
ChEA Transcription Factor Targets 2022 transcription factors binding the promoter of ILRUN gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets 2022 dataset.
CM4AI KOLF21J CRISPRi Gene Perturbation Atlas gene perturbations changing expression of ILRUN gene from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas dataset.
CM4AI U2OS Cell Map Protein Localization Assemblies assemblies containing ILRUN protein from integrated AP-MS and IF data from the CM4AI U2OS Cell Map Protein Localization Assemblies dataset.
COMPARTMENTS Curated Protein Localization Evidence Scores 2025 cellular components containing ILRUN protein from the COMPARTMENTS Curated Protein Localization Evidence Scores 2025 dataset.
COMPARTMENTS Experimental Protein Localization Evidence Scores 2025 cellular components containing ILRUN protein in low- or high-throughput protein localization assays from the COMPARTMENTS Experimental Protein Localization Evidence Scores 2025 dataset.
COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 cellular components co-occuring with ILRUN protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset.
DeepCoverMOA Drug Mechanisms of Action small molecule perturbations with high or low expression of ILRUN protein relative to other small molecule perturbations from the DeepCoverMOA Drug Mechanisms of Action dataset.
DepMap CRISPR Gene Dependency cell lines with fitness changed by ILRUN gene knockdown relative to other cell lines from the DepMap CRISPR Gene Dependency dataset.
DISEASES Experimental Gene-Disease Association Evidence Scores 2025 diseases associated with ILRUN gene in GWAS datasets from the DISEASES Experimental Gene-Disease Assocation Evidence Scores 2025 dataset.
DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 diseases co-occuring with ILRUN gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset.
GO Biological Process Annotations 2023 biological processes involving ILRUN gene from the curated GO Biological Process Annotations 2023 dataset.
GO Biological Process Annotations 2025 biological processes involving ILRUN gene from the curated GO Biological Process Annotations2025 dataset.
GO Cellular Component Annotations 2023 cellular components containing ILRUN protein from the curated GO Cellular Component Annotations 2023 dataset.
GO Cellular Component Annotations 2025 cellular components containing ILRUN protein from the curated GO Cellular Component Annotations 2025 dataset.
GO Molecular Function Annotations 2023 molecular functions performed by ILRUN gene from the curated GO Molecular Function Annotations 2023 dataset.
GO Molecular Function Annotations 2025 molecular functions performed by ILRUN gene from the curated GO Molecular Function Annotations 2025 dataset.
GTEx eQTL 2025 SNPs regulating expression of ILRUN gene from the GTEx eQTL 2025 dataset.
GTEx Tissue Gene Expression Profiles 2023 tissues with high or low expression of ILRUN gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset.
GTEx Tissue-Specific Aging Signatures tissue samples with high or low expression of ILRUN gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset.
GWAS Catalog SNP-Phenotype Associations 2025 phenotypes associated with ILRUN gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset.
IMPC Knockout Mouse Phenotypes phenotypes of mice caused by ILRUN gene knockout from the IMPC Knockout Mouse Phenotypes dataset.
JASPAR Predicted Human Transcription Factor Targets 2025 transcription factors regulating expression of ILRUN gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset.
JASPAR Predicted Mouse Transcription Factor Targets 2025 transcription factors regulating expression of ILRUN gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset.
LINCS L1000 CMAP Chemical Perturbation Consensus Signatures small molecule perturbations changing expression of ILRUN gene from the LINCS L1000 CMAP Chemical Perturbations Consensus Signatures dataset.
LINCS L1000 CMAP CRISPR Knockout Consensus Signatures gene perturbations changing expression of ILRUN gene from the LINCS L1000 CMAP CRISPR Knockout Consensus Signatures dataset.
MGI Mouse Phenotype Associations 2023 phenotypes of transgenic mice caused by ILRUN gene mutations from the MGI Mouse Phenotype Associations 2023 dataset.
NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles drug perturbations changing expression of ILRUN gene from the NIBR DRUG-seq U2OS MoA Box dataset.
Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures gene perturbations changing expression of ILRUN gene from the Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures dataset.
Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures gene perturbations changing expression of ILRUN gene from the Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures dataset.
Replogle et al., Cell, 2022 RPE1 Essential Perturb-seq Gene Perturbation Signatures gene perturbations changing expression of ILRUN gene from the Replogle et al., Cell, 2022 RPE1 Essential Perturb-seq Gene Perturbation Signatures dataset.
Rummagene Transcription Factor Associations 2026 transcription factors regulating expression of ILRUN gene from the Rummagene Transcription Factor Associations 2026 dataset.
RummaGEO Drug Perturbation Signatures drug perturbations changing expression of ILRUN gene from the RummaGEO Drug Perturbation Signatures dataset.
RummaGEO Gene Perturbation Signatures gene perturbations changing expression of ILRUN gene from the RummaGEO Gene Perturbation Signatures dataset.
Sci-Plex Drug Perturbation Signatures drug perturbations changing expression of ILRUN gene from the Sci-Plex Drug Perturbation Signatures dataset.
Tahoe Therapeutics Tahoe 100M Perturbation Atlas drug perturbations changing expression of ILRUN gene from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.
TISSUES Curated Tissue Protein Expression Evidence Scores 2025 tissues with high expression of ILRUN protein from the TISSUES Curated Tissue Protein Expression Evidence Scores 2025 dataset.
TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 tissues with high expression of ILRUN protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 dataset.
TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 tissues co-occuring with ILRUN protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset.