| Name | ITPR1 antisense RNA 1 (head to head) |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n ITPR1‐AS1 appears to be a multifunctional long noncoding RNA that contributes to cellular regulation in distinct biological settings. In neuronal populations, regulatory mechanisms governed by RNA‐binding proteins (RBPs) such as NOVA2 drive alternative splicing and intron retention of multiple transcripts, thereby influencing key processes including laminar organization, motor coordination, and synapse formation."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " Although ITPR1‐AS1 is not explicitly highlighted in the neuronal study, its membership in the broader class of regulatory lncRNAs suggests that it may be similarly subject to RBP‐mediated post‐transcriptional modifications that contribute to the functional diversity of cells in the nervous system. In a different context, analysis of clear cell renal cell carcinoma (ccRCC) has revealed that dysregulation of lncRNAs plays a vital role in tumor biology. Within a competing endogenous RNA (ceRNA) network, ITPR1‐AS1 is among a signature of nine lncRNAs whose aberrant expression correlates with overall survival and clinical outcome in ccRCC patients."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " In this setting, ITPR1‐AS1 may function by sequestering microRNAs, thereby modulating the expression of downstream mRNAs that are critical for tumor progression and prognosis. Together, these observations support a role for ITPR1‐AS1 as a context‐dependent regulatory molecule that, by influencing alternative splicing in neuronal cells and acting within a ceRNA network in renal carcinoma, contributes to both cellular differentiation and disease outcome.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Yuhki Saito, Yuan Yuan, Ilana Zucker-Scharff, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Differential NOVA2-Mediated Splicing in Excitatory and Inhibitory Neurons Regulates Cortical Development and Cerebellar Function."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Neuron (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.neuron.2018.12.019"}], "href": "https://doi.org/10.1016/j.neuron.2018.12.019"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30638744"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30638744"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Hang Yin, Xiaoyuan Wang, Xue Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Integrated analysis of long noncoding RNA associated-competing endogenous RNA as prognostic biomarkers in clear cell renal carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Sci (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/cas.13778"}], "href": "https://doi.org/10.1111/cas.13778"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30152187"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30152187"}]}]}]}
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| Synonyms | ITPR1-DT |
| NCBI Gene ID | 100996539 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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ITPR1-AS1 has 471 functional associations with biological entities spanning 4 categories (disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 6 datasets.
Click the + buttons to view associations for ITPR1-AS1 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| GEO Signatures of Differentially Expressed Genes for Diseases | disease perturbations changing expression of ITPR1-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of ITPR1-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of ITPR1-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations | transcription factor perturbations changing expression of ITPR1-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of ITPR1-AS1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of ITPR1-AS1 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |