KC6 Gene

Name keratoconus gene 6
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Chemokine KC—also known as CXCL1—functions as an early mediator of the innate inflammatory response by recruiting neutrophils to sites of tissue injury or infection. In a study of chlorine‐induced lung injury, although the type 4 phosphodiesterase inhibitor rolipram effectively reduced pulmonary edema and airway hyperreactivity, it had little or no impact on KC levels measured in airway lavage fluid, suggesting that KC’s regulation—and its role as a neutrophil chemoattractant—may be relatively independent of some therapeutic interventions."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Similarly, in a model of polymicrobial sepsis, a single dose of caffeine administered at the time of sepsis induction significantly increased plasma levels of KC 6 hours after onset. This rapid upregulation indicates that KC serves as an early biomarker of the inflammatory response during sepsis, likely reflecting its central role in mobilizing neutrophils during the acute phase of systemic infection."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n In another study exploring genetic factors that influence the host response to lipopolysaccharide (LPS), KC measured 6 hours post-challenge was used as a quantitative marker to help identify novel genes involved in innate immunity. The results from this work further reinforce the notion that KC/CXCL1 is a critical component in the orchestration of early immune responses by mediating neutrophil recruitment."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n In summary, across these studies KC/CXCL1 appears to play a pivotal role as a neutrophil chemoattractant that not only facilitates early cell recruitment during inflammation and sepsis but also serves as a reliable biomarker for monitoring acute innate immune activation (1,2,3).\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Weiyuan Chang, Jing Chen, Connie F Schlueter, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Inhibition of chlorine-induced lung injury by the type 4 phosphodiesterase inhibitor rolipram."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Toxicol Appl Pharmacol (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.taap.2012.06.017"}], "href": "https://doi.org/10.1016/j.taap.2012.06.017"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22763362"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22763362"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Gustavo Bauzá, Daniel Remick "}, {"type": "b", "children": [{"type": "t", "text": "Caffeine Improves Heart Rate Without Improving Sepsis Survival."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Shock (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1097/SHK.0000000000000399"}], "href": "https://doi.org/10.1097/SHK.0000000000000399"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25944789"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25944789"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Ivana V Yang, Claire M Wade, Hyun Min Kang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of novel genes that mediate innate immunity using inbred mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Genetics (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1534/genetics.109.107540"}], "href": "https://doi.org/10.1534/genetics.109.107540"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19805818"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19805818"}]}]}]}
NCBI Gene ID 641516
API
Download Associations
Predicted Functions View KC6's ARCHS4 Predicted Functions.
Co-expressed Genes View KC6's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View KC6's ARCHS4 Predicted Functions.

Functional Associations

KC6 has 387 functional associations with biological entities spanning 4 categories (molecular profile, disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA) extracted from 13 datasets.

Click the + buttons to view associations for KC6 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of KC6 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
ChEA Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of KC6 gene from the CHEA Transcription Factor Binding Site Profiles dataset.
ChEA Transcription Factor Targets transcription factors binding the promoter of KC6 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of KC6 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of KC6 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of KC6 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GWASdb SNP-Disease Associations diseases associated with KC6 gene in GWAS and other genetic association datasets from the GWASdb SNP-Disease Associations dataset.
GWASdb SNP-Phenotype Associations phenotypes associated with KC6 gene in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of KC6 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of KC6 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
KnockTF Gene Expression Profiles with Transcription Factor Perturbations transcription factor perturbations changing expression of KC6 gene from the KnockTF Gene Expression Profiles with Transcription Factor Perturbations dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of KC6 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
TCGA Signatures of Differentially Expressed Genes for Tumors tissue samples with high or low expression of KC6 gene relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.