KRTAP5-AS1 Gene

Name KRTAP5-1/KRTAP5-2 antisense RNA 1
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n KRTAP5‑AS1 is a long non‑coding RNA that contributes to tumorigenesis through its function as a competing endogenous RNA (ceRNA). In gastric cancer, KRTAP5‑AS1 sequesters specific microRNAs that would otherwise suppress the expression of Claudin‑4, thereby indirectly enhancing Claudin‑4 levels and promoting malignant behaviors such as increased cell proliferation, invasion, and epithelial‑to‑mesenchymal transition (EMT)."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " \n Furthermore, evidence from hepatitis B virus‑related hepatocellular carcinoma indicates that KRTAP5‑AS1 is part of an eight‑lncRNA prognostic signature; within this ceRNA network, it is co‑expressed with other key transcripts involved in cell cycle regulation, suggesting that its aberrant expression may contribute to tumor progression in a broader context."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Collectively, these studies highlight KRTAP5‑AS1 as a multifaceted regulator in cancer, with its ceRNA activity influencing both the expression of key oncogenic proteins and the modulation of cell cycle–related pathways. Thus, KRTAP5‑AS1 holds promise as a potential biomarker and therapeutic target in multiple cancer types.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Yong-Xi Song, Jing-Xu Sun, Jun-Hua Zhao, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Non-coding RNAs participate in the regulatory network of CLDN4 via ceRNA mediated miRNA evasion."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Commun (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41467-017-00304-1"}], "href": "https://doi.org/10.1038/s41467-017-00304-1"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28819095"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28819095"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Xiaonan Zhao, Zhenzi Bai, Chenghua Li, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of a Novel Eight-lncRNA Prognostic Signature for HBV-HCC and Analysis of Their Functions Based on Coexpression and ceRNA Networks."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biomed Res Int (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1155/2020/8765461"}], "href": "https://doi.org/10.1155/2020/8765461"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32382578"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32382578"}]}]}]}
NCBI Gene ID 338651
API
Download Associations
Predicted Functions View KRTAP5-AS1's ARCHS4 Predicted Functions.
Co-expressed Genes View KRTAP5-AS1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View KRTAP5-AS1's ARCHS4 Predicted Functions.

Functional Associations

KRTAP5-AS1 has 909 functional associations with biological entities spanning 3 categories (chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 12 datasets.

Click the + buttons to view associations for KRTAP5-AS1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles tissues with high or low expression of KRTAP5-AS1 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset.
Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq tissue samples with high or low expression of KRTAP5-AS1 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset.
Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles tissues with high or low expression of KRTAP5-AS1 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of KRTAP5-AS1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of KRTAP5-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Kinase Perturbations kinase perturbations changing expression of KRTAP5-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of KRTAP5-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of KRTAP5-AS1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of KRTAP5-AS1 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of KRTAP5-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of KRTAP5-AS1 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles cell types and tissues with high or low DNA methylation of KRTAP5-AS1 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset.