| Name | LCMT1 antisense RNA 2 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Recent investigations applying cutting‐edge genomic and machine learning methods have begun to reveal potential novel roles for noncoding RNAs such as LCMT1‐AS2. In one study focused on system toxicology, robust gene signatures were derived from gene expression data to classify cigarette smoke exposure and cessation in humans. Among the six novel genes predicted for their potential as biomarkers, LCMT1‐AS2 emerged as a candidate worthy of further study as an indicator of tobacco exposure."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In parallel, single‐cell transcriptomic analyses of first‐trimester human placental and decidual tissues have provided detailed maps of cellular heterogeneity and intercellular communication in the fetomaternal interface. Although this study primarily focused on defining cell types and deciphering regulatory interactions within early gestational tissues, the comprehensive dataset sets the stage for future work to explore the functional roles of candidate regulatory elements—including LCMT1‐AS2—in placental development and related pathologies."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Maurizio Giordano, Kumar Parijat Tripathi, Mario Rosario Guarracino "}, {"type": "b", "children": [{"type": "t", "text": "Ensemble of rankers for efficient gene signature extraction in smoke exposure classification."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "BMC Bioinformatics (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s12859-018-2035-3"}], "href": "https://doi.org/10.1186/s12859-018-2035-3"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29536823"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29536823"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Hemant Suryawanshi, Pavel Morozov, Alexander Straus, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A single-cell survey of the human first-trimester placenta and decidua."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Adv (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1126/sciadv.aau4788"}], "href": "https://doi.org/10.1126/sciadv.aau4788"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30402542"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30402542"}]}]}]}
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| NCBI Gene ID | 100506655 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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LCMT1-AS2 has 156 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 5 datasets.
Click the + buttons to view associations for LCMT1-AS2 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of LCMT1-AS2 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of LCMT1-AS2 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Kinase Perturbations | kinase perturbations changing expression of LCMT1-AS2 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset. | |
| GTEx Tissue-Specific Aging Signatures | tissue samples with high or low expression of LCMT1-AS2 gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of LCMT1-AS2 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |