LDLRAD4-AS1 Gene

Name LDLRAD4 antisense RNA 1
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n The long noncoding RNA LDLRAD4‐AS1, an antisense transcript of LDLRAD4, is predominantly localized in the nucleus of colorectal cancer (CRC) cells. Upregulated in a majority of CRC specimens and cell lines, LDLRAD4‐AS1 is associated with poor patient prognosis. Functionally, LDLRAD4‐AS1 enhances CRC cell migration and invasion in vitro and promotes metastasis in vivo. Mechanistically, LDLRAD4‐AS1 destabilizes the mRNA of LDLRAD4, leading to its decreased expression. This downregulation of LDLRAD4 subsequently induces epithelial‐to‐mesenchymal transition (EMT) via the upregulation of the transcription factor Snail, thereby establishing a novel LDLRAD4‐AS1–LDLRAD4–Snail regulatory axis that contributes to CRC progression and metastasis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Shaobo Mo, Long Zhang, Weixing Dai, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Antisense lncRNA LDLRAD4-AS1 promotes metastasis by decreasing the expression of LDLRAD4 and predicts a poor prognosis in colorectal cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Death Dis (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41419-020-2338-y"}], "href": "https://doi.org/10.1038/s41419-020-2338-y"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32111819"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32111819"}]}]}]}
NCBI Gene ID 100288122
API
Download Associations
Predicted Functions View LDLRAD4-AS1's ARCHS4 Predicted Functions.
Co-expressed Genes View LDLRAD4-AS1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LDLRAD4-AS1's ARCHS4 Predicted Functions.

Functional Associations

LDLRAD4-AS1 has 387 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 10 datasets.

Click the + buttons to view associations for LDLRAD4-AS1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of LDLRAD4-AS1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of LDLRAD4-AS1 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of LDLRAD4-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Kinase Perturbations kinase perturbations changing expression of LDLRAD4-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations transcription factor perturbations changing expression of LDLRAD4-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of LDLRAD4-AS1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of LDLRAD4-AS1 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
GTEx Tissue-Specific Aging Signatures tissue samples with high or low expression of LDLRAD4-AS1 gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of LDLRAD4-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of LDLRAD4-AS1 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.