LEF1-AS1 Gene

Name LEF1 antisense RNA 1
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n LEF1‐AS1 is a long noncoding RNA encoded in the lymphoid enhancer‐binding factor 1 (LEF1) locus that exhibits highly context‐dependent roles in human disease. In several solid tumors and vascular disorders—including coronary artery atherosclerosis, lung cancer, glioma, osteosarcoma, hepatocellular carcinoma, colorectal cancer, retinoblastoma, non–small‐cell lung cancer, prostate cancer, and ovarian cancer—LEF1‐AS1 is frequently upregulated and contributes to enhanced cell proliferation, migration, invasion, metastasis, chemoresistance, and angiogenesis. In these settings, LEF1‐AS1 acts predominantly as a competing endogenous RNA by sponging specific microRNAs (for example, miR‐544a, miR‐489‐3p, miR‐10a‐5p, miR‐136‐5p, miR‐30‐5p, miR‐221, miR‐330‐5p, and miR‐1285‐3p) to control downstream effectors such as PTEN, FOXP1, HIGD1A, LEF1, FUT8, SOX9, GJA1, CD44 and others—thereby activating oncogenic pathways including Wnt/β‐catenin, AKT, Hippo and additional signaling cascades."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "11"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n In contrast, studies in hematological malignancies such as myelodysplastic syndrome and other myeloid disorders have shown that LEF1‐AS1 is downregulated, with its exogenous expression leading to cell cycle arrest via upregulation of tumor suppressors (for example, p21 and p27) and modulation of metabolic regulators."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "12"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Moreover, LEF1‐AS1 regulates additional biological processes beyond oncogenesis. In dental pulp stem cells, for instance, LEF1‐AS1 promotes osteogenic differentiation by sponging miR‐24‐3p to modulate TGFBR1 expression, while in models of spinal cord injury its knockdown alleviates inflammation and apoptosis via the miR‐222‐5p/RAMP3 axis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "14"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Collectively, these findings underscore the versatile and context‐dependent regulatory functions of LEF1‐AS1, highlighting its potential as both a prognostic biomarker and a therapeutic target across a broad spectrum of diseases ranging from cancer to cardiovascular and neurologic disorders."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "16", "end_ref": "18"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Lina Zhang, Changyong Zhou, Qiaoji Qin, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "LncRNA LEF1-AS1 promotes metastasis of prostatic carcinoma via the Wnt/β-catenin pathway."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Cell Int (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s12935-020-01624-x"}], "href": "https://doi.org/10.1186/s12935-020-01624-x"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33292271"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33292271"}]}]}]}
Synonyms LEF1NAT
NCBI Gene ID 641518
API
Download Associations
Predicted Functions View LEF1-AS1's ARCHS4 Predicted Functions.
Co-expressed Genes View LEF1-AS1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LEF1-AS1's ARCHS4 Predicted Functions.

Functional Associations

LEF1-AS1 has 891 functional associations with biological entities spanning 5 categories (organism, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 17 datasets.

Click the + buttons to view associations for LEF1-AS1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles tissues with high or low expression of LEF1-AS1 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset.
Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq tissue samples with high or low expression of LEF1-AS1 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset.
Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles tissues with high or low expression of LEF1-AS1 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of LEF1-AS1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
CellMarker Gene-Cell Type Associations cell types associated with LEF1-AS1 gene from the CellMarker Gene-Cell Type Associations dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of LEF1-AS1 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
GEO Signatures of Differentially Expressed Genes for Diseases disease perturbations changing expression of LEF1-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of LEF1-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of LEF1-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations transcription factor perturbations changing expression of LEF1-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Viral Infections virus perturbations changing expression of LEF1-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of LEF1-AS1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of LEF1-AS1 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
HuBMAP Azimuth Cell Type Annotations cell types associated with LEF1-AS1 gene from the HuBMAP Azimuth Cell Type Annotations dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of LEF1-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of LEF1-AS1 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles cell types and tissues with high or low DNA methylation of LEF1-AS1 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset.