LINC-ROR Gene

HGNC Family Non-coding RNAs
Name long intergenic non-protein coding RNA, regulator of reprogramming
Description This gene produces a long non-coding RNA that regulates the reprogramming of pluripotent stem cells. This RNA suppresses induction of tumor protein p53 after DNA damage. It is thought to act as a sponge for microRNAs that regulate stem cell factors POU class 5 homeobox 1, Nanog, and SRY-box 2. This RNA may also have a extracellular role in modulating response to hypoxia in hepatocellular cancer cells. Expression of this transcript is associated with tumor progression and epithelial to mesenchymal transition and metastasis. [provided by RefSeq, Dec 2017]
Summary
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Synonyms ROR, LINCRNA-ROR, lincRNA-ST8SIA3
NCBI Gene ID 100885779
API
Download Associations
Predicted Functions View LINC-ROR's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC-ROR's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC-ROR's ARCHS4 Predicted Functions.

Functional Associations

LINC-ROR has 185 functional associations with biological entities spanning 3 categories (functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 6 datasets.

Click the + buttons to view associations for LINC-ROR from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC-ROR gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC-ROR gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
GeneRIF Biological Term Annotations biological terms co-occuring with LINC-ROR gene in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of LINC-ROR gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC-ROR gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of LINC-ROR gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.