LINC00092 Gene

Name long intergenic non-protein coding RNA 92
Summary
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In epithelial ovarian cancer, LINC00092 functions as a key mediator of metastatic progression by driving interactions between tumor cells and cancer‐associated fibroblasts, thereby promoting peritoneal dissemination."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In breast invasive ductal carcinoma, LINC00092 is downregulated and its overexpression suppresses tumor cell proliferation, colony formation, migration, and invasion via modulation of the miR‐1827/SFRP1 axis, suggesting a tumor suppressor function."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " Similarly, in lung adenocarcinoma, reduced expression of LINC00092 is associated with advanced pathological stage and poor overall survival, with potential involvement in NF-κB, HIF-1, and ErbB signaling pathways."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": " In the setting of cardiac fibrosis, LINC00092 attenuates cardiac fibroblast activation by suppressing glycolysis and inhibiting ERK signaling, highlighting its role in metabolic reprogramming."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": " Beyond these functions, LINC00092 has emerged as a potential diagnostic biomarker in colon adenocarcinoma"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": "and as a component of prognostic signatures in small-cell lung cancer and breast cancer where its altered expression correlates with patient outcomes."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": " Collectively, these studies indicate that LINC00092 is an important regulator of tumor progression, metastasis, and cellular metabolism, with potential utility as a biomarker and therapeutic target across multiple disease contexts.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Linjie Zhao, Gaili Ji, Xiaobing Le, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long Noncoding RNA LINC00092 Acts in Cancer-Associated Fibroblasts to Drive Glycolysis and Progression of Ovarian Cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Res (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1158/0008-5472.CAN-16-1615"}], "href": "https://doi.org/10.1158/0008-5472.CAN-16-1615"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28087599"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28087599"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Chun-Ming Zhao, Lin-Lin Li, Jia-Wen Xu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC00092 Suppresses the Malignant Progression of Breast Invasive Ductal Carcinoma Through Modulating SFRP1 Expression by Sponging miR-1827."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Transplant (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1177/09636897221086967"}], "href": "https://doi.org/10.1177/09636897221086967"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35343265"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35343265"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Xin Wang, Xianwei Wang, Guichuan Huang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Lower expression of LINC00092 in lung adenocarcinoma might mean poorer prognosis: A study based on data mining and bioinformatics."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Medicine (Baltimore) (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1097/MD.0000000000023012"}], "href": "https://doi.org/10.1097/MD.0000000000023012"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33126385"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33126385"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Xiu-Qing Shen, Qiu-Mei Wu, Cai-Hong Yang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Four Low Expression LncRNAs are Associated with Prognosis of Human Lung Adenocarcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Clin Lab (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.7754/Clin.Lab.2020.200211"}], "href": "https://doi.org/10.7754/Clin.Lab.2020.200211"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33073959"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33073959"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Zhi-Teng Chen, Hai-Feng Zhang, Meng Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNA Linc00092 inhibits cardiac fibroblast activation by altering glycolysis in an ERK-dependent manner."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Signal (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.cellsig.2020.109708"}], "href": "https://doi.org/10.1016/j.cellsig.2020.109708"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32653641"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32653641"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Wei Huang, Zhen Liu, Yu Li, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of long noncoding RNAs biomarkers for diagnosis and prognosis in patients with colon adenocarcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Biochem (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jcb.27697"}], "href": "https://doi.org/10.1002/jcb.27697"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30269368"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30269368"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Jie Wu, Maolan Li, Yijian Zhang "}, {"type": "b", "children": [{"type": "t", "text": "Long noncoding RNA HOXA-AS2 regulates the expression of SCN3A by sponging miR-106a in breast cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Biochem (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jcb.28706"}], "href": "https://doi.org/10.1002/jcb.28706"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30993766"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30993766"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Zhihui Zhang, Yuejun Luo, Chaoqi Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "An immune-related lncRNA signature predicts prognosis and adjuvant chemotherapeutic response in patients with small-cell lung cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Cell Int (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s12935-021-02357-1"}], "href": "https://doi.org/10.1186/s12935-021-02357-1"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34930244"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34930244"}]}]}]}
Synonyms BA346B7.1, NCRNA00092
NCBI Gene ID 100188953
API
Download Associations
Predicted Functions View LINC00092's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC00092's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC00092's ARCHS4 Predicted Functions.

Functional Associations

LINC00092 has 1,340 functional associations with biological entities spanning 4 categories (molecular profile, disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA) extracted from 19 datasets.

Click the + buttons to view associations for LINC00092 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00092 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
CCLE Cell Line Gene Expression Profiles cell lines with high or low expression of LINC00092 gene relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset.
ChEA Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of LINC00092 gene from the CHEA Transcription Factor Binding Site Profiles dataset.
ChEA Transcription Factor Targets transcription factors binding the promoter of LINC00092 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00092 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at LINC00092 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of LINC00092 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of LINC00092 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GEO Signatures of Differentially Expressed Genes for Diseases disease perturbations changing expression of LINC00092 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of LINC00092 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of LINC00092 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of LINC00092 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
GTEx Tissue-Specific Aging Signatures tissue samples with high or low expression of LINC00092 gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of LINC00092 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00092 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of LINC00092 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles cell types and tissues with high or low DNA methylation of LINC00092 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at LINC00092 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.
TCGA Signatures of Differentially Expressed Genes for Tumors tissue samples with high or low expression of LINC00092 gene relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.