| Name | long intergenic non-protein coding RNA 114 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Multiple independent studies have demonstrated that the long non‐coding RNA LINC00114 plays diverse regulatory roles in human disease, particularly in various cancers. In colorectal cancer, LINC00114 is a component of a metastasis‐associated competing endogenous RNA network; its inhibition has been shown to enhance cell migration, invasion, and proliferation while directly interacting with miR‑135a, which supports its function as a tumor suppressor in controlling metastatic potential."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In nasopharyngeal carcinoma, LINC00114 is upregulated and promotes cell proliferation, migration, and radioresistance by targeting miR‑203 and modulating the ERK/JNK signaling pathway; its knockdown effectively reduces tumor growth and improves radiosensitivity."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " Similarly, in esophageal cancer, LINC00114 is overexpressed and facilitates tumor development by recruiting EZH2 to mediate the trimethylation of H3K27 at the promoter region of the tumor suppressor gene DLC1, thereby promoting cell growth, migration, invasion, and enhanced glycolytic metabolism."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": " In colon cancer, elevated levels of LINC00114 are associated with early tumor stages and poorer overall survival, suggesting its potential as an early diagnostic marker and prognostic indicator in this malignancy."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": " Beyond cancer, epigenome‐wide analyses have identified differential DNA methylation at the promoter region of LINC00114 in maternal blood that is significantly associated with spontaneous preterm birth, highlighting a potential role of LINC00114 as a biomarker in obstetric complications."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": " Moreover, transcriptome mapping of the human hippocampus has revealed an intrinsic over‐expression of LINC00114 compared to the whole brain, suggesting that it may contribute to region‑specific gene regulation in the central nervous system."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Shuzhen Liu, Qing Cao, Guoyan An, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of the 3-lncRNA Signature as a Prognostic Biomarker for Colorectal Cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Int J Mol Sci (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3390/ijms21249359"}], "href": "https://doi.org/10.3390/ijms21249359"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33302562"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33302562"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Y-Y Han, K Liu, J Xie, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC00114 promoted nasopharyngeal carcinoma progression and radioresistance in vitro and in vivo through regulating ERK/JNK signaling pathway via targeting miR-203."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Eur Rev Med Pharmacol Sci (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.26355/eurrev_202003_20517"}], "href": "https://doi.org/10.26355/eurrev_202003_20517"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32196600"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32196600"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Jianzhang Qin, Yishuai Li, Zhe Li, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC00114 stimulates growth and glycolysis of esophageal cancer cells by recruiting EZH2 to enhance H3K27me3 of DLC1."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Clin Epigenetics (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s13148-022-01258-y"}], "href": "https://doi.org/10.1186/s13148-022-01258-y"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35414117"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35414117"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Gu Xi, Xu Ziyu, Liu Yiting, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Construction of competing endogenous RNA network and identification of novel molecular biomarkers in colon cancer: A bioinformatic analysis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Medicine (Baltimore) (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1097/MD.0000000000025369"}], "href": "https://doi.org/10.1097/MD.0000000000025369"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33832120"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33832120"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Xiumei Hong, Ben Sherwood, Christine Ladd-Acosta, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Genome-wide DNA methylation associations with spontaneous preterm birth in US blacks: findings in maternal and cord blood samples."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Epigenetics (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1080/15592294.2017.1287654"}], "href": "https://doi.org/10.1080/15592294.2017.1287654"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28165855"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28165855"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Maria Caracausi, Vania Rigon, Allison Piovesan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A quantitative transcriptome reference map of the normal human hippocampus."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hippocampus (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/hipo.22483"}], "href": "https://doi.org/10.1002/hipo.22483"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26108741"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26108741"}]}]}]}
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| Synonyms | NCRNA00114, C21ORF24 |
| Proteins | CU024_HUMAN |
| NCBI Gene ID | 400866 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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LINC00114 has 862 functional associations with biological entities spanning 6 categories (molecular profile, organism, disease, phenotype or trait, functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 20 datasets.
Click the + buttons to view associations for LINC00114 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray | tissue samples with high or low expression of LINC00114 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00114 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| ChEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of LINC00114 gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
| ChEA Transcription Factor Targets | transcription factors binding the promoter of LINC00114 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00114 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at LINC00114 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of LINC00114 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of LINC00114 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of LINC00114 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Viral Infections | virus perturbations changing expression of LINC00114 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of LINC00114 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GWASdb SNP-Disease Associations | diseases associated with LINC00114 gene in GWAS and other genetic association datasets from the GWASdb SNP-Disease Associations dataset. | |
| GWASdb SNP-Phenotype Associations | phenotypes associated with LINC00114 gene in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of LINC00114 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00114 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| LOCATE Predicted Protein Localization Annotations | cellular components predicted to contain LINC00114 protein from the LOCATE Predicted Protein Localization Annotations dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of LINC00114 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles | cell types and tissues with high or low DNA methylation of LINC00114 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at LINC00114 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |
| TCGA Signatures of Differentially Expressed Genes for Tumors | tissue samples with high or low expression of LINC00114 gene relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset. | |