| Name | long intergenic non-protein coding RNA 115 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n LINC00115 is an oncogenic long non‐coding RNA that is frequently overexpressed in a variety of solid tumors. In several cancer types—including breast, lung, glioma, cervical, colorectal, ovarian, prostate, and retinoblastoma—it is associated with poor clinical outcomes by promoting malignant cellular behaviors such as proliferation, migration, invasion, and maintenance of stem‐like properties (1,2,3,4,5,6,7,8,9,10). Mechanistically, LINC00115 commonly acts as a competing endogenous RNA (ceRNA) by “sponging” tumor‐suppressive microRNAs, thereby releasing oncogenic targets. For instance, in triple‐negative breast cancer it sequesters miR‑7 to decrease the expression of KLF4 and promote metastasis (2); in lung cancer, LINC00115 binds to miR‑607 to regulate ITGB1 expression and also modulates epithelial‑mesenchymal transition markers, thereby enhancing invasion and migration (3,10). In glioma, its upregulation by TGF‑β enables LINC00115 to sponge the miR‑200 family and increase ZEB1 and ZNF596 levels, contributing to glioma stem‑like cell self‑renewal and tumor growth (4). Similarly, in colorectal and retinoblastoma settings, LINC00115 targets miR‑489‑3p to activate the PI3K/AKT/mTOR pathway or to upregulate PFKFB2, respectively, thereby sustaining tumor progression (6,9). In ovarian and prostate cancers, the ceRNA action of LINC00115—through interactions with miR‑30a and miR‑212‑5p, respectively—leads to upregulation of SOX9 or FZD5 and subsequent activation of the Wnt/β‑catenin pathway (7,8). Additionally, its dysregulated expression and incorporation into multi‑RNA prognostic signatures further highlight its potential as a diagnostic and prognostic biomarker in various malignancies (1,5).\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Overall, the available studies indicate that LINC00115 exerts its oncogenic effects by modulating key signaling pathways through miRNA sponging, making it a promising target for therapeutic intervention across multiple cancer types."}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "10"}]}, {"type": "t", "text": ""}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Bin Jiang, Su Hailong, Jun Yuan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of oncogenic long noncoding RNA SNHG12 and DUXAP8 in human bladder cancer through a comprehensive profiling analysis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biomed Pharmacother (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.biopha.2018.09.025"}], "href": "https://doi.org/10.1016/j.biopha.2018.09.025"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30243082"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30243082"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Chunlei Yuan, Xuliang Luo, Sijia Duan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long noncoding RNA LINC00115 promotes breast cancer metastasis by inhibiting miR-7."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "FEBS Open Bio (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/2211-5463.12842"}], "href": "https://doi.org/10.1002/2211-5463.12842"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32175684"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32175684"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Bin Wu, Xingkui Xue, Shaoming Lin, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA LINC00115 facilitates lung cancer progression through miR-607/ITGB1 pathway."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Environ Toxicol (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/tox.23367"}], "href": "https://doi.org/10.1002/tox.23367"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34643030"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34643030"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Jianming Tang, Bo Yu, Yanxin Li, et al. "}, {"type": "b", "children": [{"type": "t", "text": "TGF-β-activated lncRNA LINC00115 is a critical regulator of glioma stem-like cell tumorigenicity."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "EMBO Rep (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.15252/embr.201948170"}], "href": "https://doi.org/10.15252/embr.201948170"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31599491"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31599491"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Shiyin Ooi, Yuandong Liao, Pan Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of Long Noncoding RNA Expression Profiles in HPV-Negative Cervical Cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Gynecol Obstet Invest (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1159/000510030"}], "href": "https://doi.org/10.1159/000510030"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33053555"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33053555"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Weiyu Feng, Baodong Li, Jinbang Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long Non-coding RNA LINC00115 Contributes to the Progression of Colorectal Cancer by Targeting miR-489-3p via the PI3K/AKT/mTOR Pathway."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Front Genet (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3389/fgene.2020.567630"}], "href": "https://doi.org/10.3389/fgene.2020.567630"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33193658"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33193658"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Rui Hou, Luo Jiang "}, {"type": "b", "children": [{"type": "t", "text": "LINC00115 promotes stemness and inhibits apoptosis of ovarian cancer stem cells by upregulating SOX9 and inhibiting the Wnt/β-catenin pathway through competitively binding to microRNA-30a."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Cell Int (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s12935-021-02019-2"}], "href": "https://doi.org/10.1186/s12935-021-02019-2"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34238293"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34238293"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Naixiong Peng, Zejian Zhang, Yaomin Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Down-regulated LINC00115 inhibits prostate cancer cell proliferation and invasion via targeting miR-212-5p/FZD5/Wnt/β-catenin axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Mol Med (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/jcmm.17000"}], "href": "https://doi.org/10.1111/jcmm.17000"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34697900"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34697900"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Fang Ji, Chunhua Dai, Meng Xin, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long intergenic non-protein coding RNA 115 (LINC00115) aggravates retinoblastoma progression by targeting microRNA miR-489-3p that downregulates 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 (PFKFB2)."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Bioengineered (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1080/21655979.2022.2037362"}], "href": "https://doi.org/10.1080/21655979.2022.2037362"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35184643"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35184643"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Lili Shao, Qiongzhu Yu, Xiaomin Lu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Downregulation of LINC00115 inhibits the proliferation and invasion of lung cancer cells "}, {"type": "a", "children": [{"type": "t", "text": "i"}], "href": "i"}, {"type": "t", "text": "in vitro"}, {"type": "a", "children": [{"type": "t", "text": "/i"}], "href": "/i"}, {"type": "t", "text": " and "}, {"type": "a", "children": [{"type": "t", "text": "i"}], "href": "i"}, {"type": "t", "text": "in vitro"}, {"type": "a", "children": [{"type": "t", "text": "/i"}], "href": "/i"}, {"type": "t", "text": "."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Ann Transl Med (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.21037/atm-21-3724"}], "href": "https://doi.org/10.21037/atm-21-3724"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34532393"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34532393"}]}]}]}
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| Synonyms | NCRNA00115 |
| NCBI Gene ID | 79854 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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LINC00115 has 2,757 functional associations with biological entities spanning 6 categories (molecular profile, organism, chemical, disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA) extracted from 30 datasets.
Click the + buttons to view associations for LINC00115 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of LINC00115 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset. | |
| Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray | tissue samples with high or low expression of LINC00115 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray dataset. | |
| Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq | tissue samples with high or low expression of LINC00115 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset. | |
| Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of LINC00115 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset. | |
| BioGPS Cell Line Gene Expression Profiles | cell lines with high or low expression of LINC00115 gene relative to other cell lines from the BioGPS Cell Line Gene Expression Profiles dataset. | |
| BioGPS Human Cell Type and Tissue Gene Expression Profiles | cell types and tissues with high or low expression of LINC00115 gene relative to other cell types and tissues from the BioGPS Human Cell Type and Tissue Gene Expression Profiles dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00115 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| ChEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of LINC00115 gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
| ChEA Transcription Factor Targets | transcription factors binding the promoter of LINC00115 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
| CMAP Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of LINC00115 gene from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00115 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at LINC00115 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of LINC00115 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of LINC00115 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| GEO Signatures of Differentially Expressed Genes for Diseases | disease perturbations changing expression of LINC00115 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset. | |
| GEO Signatures of Differentially Expressed Genes for Kinase Perturbations | kinase perturbations changing expression of LINC00115 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of LINC00115 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations | transcription factor perturbations changing expression of LINC00115 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Viral Infections | virus perturbations changing expression of LINC00115 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of LINC00115 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of LINC00115 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of LINC00115 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00115 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles | cell lines with high or low expression of LINC00115 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset. | |
| LINCS L1000 CMAP Chemical Perturbation Consensus Signatures | small molecule perturbations changing expression of LINC00115 gene from the LINCS L1000 CMAP Chemical Perturbations Consensus Signatures dataset. | |
| LINCS L1000 CMAP CRISPR Knockout Consensus Signatures | gene perturbations changing expression of LINC00115 gene from the LINCS L1000 CMAP CRISPR Knockout Consensus Signatures dataset. | |
| MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations | gene perturbations changing expression of LINC00115 gene from the MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations dataset. | |
| Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles | cell types and tissues with high or low DNA methylation of LINC00115 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at LINC00115 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |
| TCGA Signatures of Differentially Expressed Genes for Tumors | tissue samples with high or low expression of LINC00115 gene relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset. | |