LINC00222 Gene

Name long intergenic non-protein coding RNA 222
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Long noncoding RNAs (lncRNAs) have emerged as critical regulators of cellular processes underlying aging, bone homeostasis, and cancer. While previous studies have underscored the roles of transcription factors and gene regulatory networks in longevity (1) and bone mineral density regulation through components of the Wnt signaling pathway (2), recent evidence reveals that the lncRNA LINC00222 functions as a tumor suppressor in lung adenocarcinoma (3). In lung adenocarcinoma tissues, LINC00222 is significantly downregulated compared to adjacent normal lung tissues. Functional assays demonstrated that restoration of LINC00222 expression markedly inhibits cell proliferation, migration, and invasion, while also promoting apoptosis. Furthermore, overexpression of LINC00222 enhances the activity of glycogen synthase kinase-3β (GSK3β), implicating modulation of the Wnt signaling pathway as an underlying mechanism. Collectively, these findings position LINC00222 as a promising prognostic biomarker and potential therapeutic target in lung adenocarcinoma."}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "3"}]}, {"type": "t", "text": ""}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Timothy A Donlon, Brian J Morris, Randi Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "FOXO3 longevity interactome on chromosome 6."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Aging Cell (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/acel.12625"}], "href": "https://doi.org/10.1111/acel.12625"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28722347"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28722347"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Benjamin H Mullin, John P Walsh, Hou-Feng Zheng, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Genome-wide association study using family-based cohorts identifies the WLS and CCDC170/ESR1 loci as associated with bone mineral density."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "BMC Genomics (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s12864-016-2481-0"}], "href": "https://doi.org/10.1186/s12864-016-2481-0"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26911590"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26911590"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Hongyan Zhang, Yuan Wang, Jibin Lu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNA LINC00222 regulates GSK3β activity and promotes cell apoptosis in lung adenocarcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biomed Pharmacother (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.biopha.2018.06.165"}], "href": "https://doi.org/10.1016/j.biopha.2018.06.165"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29990868"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29990868"}]}]}]}
Synonyms C6ORF181, DJ354J5.2, NCRNA00222
NCBI Gene ID 387111
API
Download Associations
Predicted Functions View LINC00222's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC00222's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC00222's ARCHS4 Predicted Functions.

Functional Associations

LINC00222 has 736 functional associations with biological entities spanning 3 categories (molecular profile, cell line, cell type or tissue, gene, protein or microRNA) extracted from 14 datasets.

Click the + buttons to view associations for LINC00222 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00222 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
ChEA Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of LINC00222 gene from the CHEA Transcription Factor Binding Site Profiles dataset.
ChEA Transcription Factor Targets transcription factors binding the promoter of LINC00222 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00222 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at LINC00222 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of LINC00222 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of LINC00222 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of LINC00222 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of LINC00222 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
GTEx Tissue-Specific Aging Signatures tissue samples with high or low expression of LINC00222 gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of LINC00222 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00222 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of LINC00222 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at LINC00222 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.