| Name | long intergenic non-protein coding RNA 284 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Long noncoding RNA LINC00284 has emerged as a critical regulator in multiple human diseases, particularly in various cancers, where it frequently acts as an oncogenic driver by modulating gene expression through competitive endogenous RNA (ceRNA) mechanisms and other regulatory interactions. In triple‐negative breast cancer, for instance, LINC00284 (also known as NRAD1) is enriched in cancer stem cells and exerts its effects by localizing to the nucleus to regulate gene expression via direct chromatin interactions, thereby promoting cell survival and tumor growth."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In hepatocellular carcinoma, LINC00284 is part of a ceRNA network associated with recurrence‐free survival, suggesting its potential role as a prognostic biomarker."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " In ovarian cancer, high LINC00284 expression contributes to angiogenesis and tumorigenesis through interactions with mesoderm‐specific transcripts, while in colorectal cancer it promotes malignant phenotypes by sponging microRNA‐27a to elevate c‐Met signaling"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": ";."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": " Similarly, in serous ovarian carcinoma, elevated LINC00284—potentially driven by transcription factors like SOX9—is associated with poor prognosis and functions within a ceRNA network that may underpin tumor initiation and progression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": " Evidence from studies in intervertebral disc degeneration indicates that overexpression of LINC00284 may also contribute to pathologic changes in non-neoplastic conditions."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": " In papillary thyroid cancer, LINC00284 facilitates cell proliferation and tumor growth by sequestering miR‑3127‑5p to de-repress E2F7, and in another thyroid cancer study it promotes malignancy via a miR‑30d‑5p/ADAM12 axis that activates Notch signaling"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": ";."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "8"}]}, {"type": "t", "text": " In lung cancer, upregulated LINC00284 correlates with enhanced migration and poorer clinical outcomes"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "9"}]}, {"type": "t", "text": ", whereas in oral squamous cell carcinoma it promotes proliferation and migration by sponging miR‑211‑3p to increase the expression of oncogenic factors such as MAFG and by stabilizing KAZN mRNA via interaction with FUS."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "10"}]}, {"type": "t", "text": " Finally, in gastric and muscle‐invasive bladder cancers, dysregulated LINC00284 expression has been closely linked with overall survival, reinforcing its candidacy as a prognostic biomarker and a potential therapeutic target."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "11", "end_ref": "13"}]}, {"type": "t", "text": " Collectively, these studies underscore the multifaceted roles of LINC00284 in regulating oncogenic signaling pathways, promoting cell proliferation, invasion, migration, angiogenesis, and the maintenance of cancer stem cell properties, thereby offering promising avenues for diagnostic and targeted therapeutic strategies across a spectrum of malignancies.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Dejan Vidovic, Thomas T Huynh, Prathyusha Konda, et al. "}, {"type": "b", "children": [{"type": "t", "text": "ALDH1A3-regulated long non-coding RNA NRAD1 is a potential novel target for triple-negative breast tumors and cancer stem cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Death Differ (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41418-019-0362-1"}], "href": "https://doi.org/10.1038/s41418-019-0362-1"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31197235"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31197235"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Jing Xu, Jing Zhang, Fenglian Shan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "SSTR5‑AS1 functions as a ceRNA to regulate CA2 by sponging miR‑15b‑5p for the development and prognosis of HBV‑related hepatocellular carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Med Rep (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3892/mmr.2019.10736"}], "href": "https://doi.org/10.3892/mmr.2019.10736"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31638225"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31638225"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Zhengyi Ruan, Dong Zhao "}, {"type": "b", "children": [{"type": "t", "text": "Long intergenic noncoding RNA LINC00284 knockdown reduces angiogenesis in ovarian cancer cells "}, {"type": "a", "children": [{"type": "t", "text": "i"}], "href": "i"}, {"type": "t", "text": "via"}, {"type": "a", "children": [{"type": "t", "text": "/i"}], "href": "/i"}, {"type": "t", "text": " up-regulation of MEST through NF-κB1."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "FASEB J (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1096/fj.201900101RR"}], "href": "https://doi.org/10.1096/fj.201900101RR"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31574234"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31574234"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Jun You, Jiayi Li, Chunlin Ke, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Oncogenic long intervening noncoding RNA Linc00284 promotes c-Met expression by sponging miR-27a in colorectal cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncogene (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41388-021-01839-w"}], "href": "https://doi.org/10.1038/s41388-021-01839-w"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34050266"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34050266"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Shasha Wang, Lu Zhang, Lin Tao, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Construction and Investigation of an LINC00284-Associated Regulatory Network in Serous Ovarian Carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Dis Markers (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1155/2020/9696285"}], "href": "https://doi.org/10.1155/2020/9696285"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32076467"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32076467"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Min Zhu, Xiaoling Yan, Yin Zhao, et al. "}, {"type": "b", "children": [{"type": "t", "text": "lncRNA LINC00284 promotes nucleus pulposus cell proliferation and ECM synthesis via regulation of the miR‑205‑3p/Wnt/β‑catenin axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Med Rep (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3892/mmr.2022.12695"}], "href": "https://doi.org/10.3892/mmr.2022.12695"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35322864"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35322864"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Bin Zhou, Yugang Ge, Qing Shao, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long noncoding RNA LINC00284 facilitates cell proliferation in papillary thyroid cancer via impairing miR-3127-5p targeted E2F7 suppression."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Death Discov (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41420-021-00551-8"}], "href": "https://doi.org/10.1038/s41420-021-00551-8"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34226533"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34226533"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Chunmei Hu, Zhichen Kang, Lixin Guo, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The Role of LINC00284 in the Development of Thyroid Cancer "}, {"type": "a", "children": [{"type": "t", "text": "i"}], "href": "i"}, {"type": "t", "text": "via"}, {"type": "a", "children": [{"type": "t", "text": "/i"}], "href": "/i"}, {"type": "t", "text": " Its Regulation of the MicroRNA-30d-5p-Mediated ADAM12/Notch Axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Front Oncol (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3389/fonc.2021.643039"}], "href": "https://doi.org/10.3389/fonc.2021.643039"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34490077"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34490077"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Wang Sheng, Weixi Guo, Fang Lu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Upregulation of Linc00284 Promotes Lung Cancer Progression by Regulating the miR-205-3p/c-Met Axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Front Genet (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3389/fgene.2021.694571"}], "href": "https://doi.org/10.3389/fgene.2021.694571"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34616424"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34616424"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Dayong Yan, Fuhua Wu, Caixia Peng, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Silencing of LINC00284 inhibits cell proliferation and migration in oral squamous cell carcinoma by the miR-211-3p/MAFG axis and FUS/KAZN axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Biol Ther (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1080/15384047.2021.1877864"}], "href": "https://doi.org/10.1080/15384047.2021.1877864"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33618612"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33618612"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Yangjing Zhao, Hui Wang, Chengjiang Wu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Construction and investigation of lncRNA-associated ceRNA regulatory network in papillary thyroid cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncol Rep (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3892/or.2018.6207"}], "href": "https://doi.org/10.3892/or.2018.6207"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29328463"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29328463"}]}, {"type": "r", "ref": 12, "children": [{"type": "t", "text": "Hanbo Wang, Leilei Niu, Shaobo Jiang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Comprehensive analysis of aberrantly expressed profiles of lncRNAs and miRNAs with associated ceRNA network in muscle-invasive bladder cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncotarget (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.18632/oncotarget.13363"}], "href": "https://doi.org/10.18632/oncotarget.13363"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27863388"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27863388"}]}, {"type": "r", "ref": 13, "children": [{"type": "t", "text": "Chao Xing, Zhengzhai Cai, Jian Gong, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of Potential Biomarkers Involved in Gastric Cancer Through Integrated Analysis of Non-Coding RNA Associated Competing Endogenous RNAs Network."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Clin Lab (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.7754/Clin.Lab.2018.180419"}], "href": "https://doi.org/10.7754/Clin.Lab.2018.180419"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30336538"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30336538"}]}]}]}
|
| Synonyms | NCRNA00284 |
| NCBI Gene ID | 121838 |
| API | |
| Download Associations | |
| Predicted Functions |
![]() |
| Co-expressed Genes |
![]() |
| Expression in Tissues and Cell Lines |
![]() |
LINC00284 has 564 functional associations with biological entities spanning 5 categories (molecular profile, functional term, phrase or reference, disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA) extracted from 20 datasets.
Click the + buttons to view associations for LINC00284 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00284 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| CCLE Cell Line Gene Expression Profiles | cell lines with high or low expression of LINC00284 gene relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset. | |
| ChEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of LINC00284 gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
| ChEA Transcription Factor Targets | transcription factors binding the promoter of LINC00284 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00284 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at LINC00284 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of LINC00284 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of LINC00284 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| GeneSigDB Published Gene Signatures | PubMedIDs of publications reporting gene signatures containing LINC00284 from the GeneSigDB Published Gene Signatures dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of LINC00284 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Kinase Perturbations | kinase perturbations changing expression of LINC00284 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations | transcription factor perturbations changing expression of LINC00284 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of LINC00284 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of LINC00284 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| GWASdb SNP-Disease Associations | diseases associated with LINC00284 gene in GWAS and other genetic association datasets from the GWASdb SNP-Disease Associations dataset. | |
| GWASdb SNP-Phenotype Associations | phenotypes associated with LINC00284 gene in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of LINC00284 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00284 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of LINC00284 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at LINC00284 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |