LINC00305 Gene

Name long intergenic non-protein coding RNA 305
Description Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Mar 2025]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n LINC00305 is a long intergenic noncoding RNA with emerging roles in the regulation of vascular inflammation and immune responses. Studies have shown that its expression is enriched in atherosclerotic plaques and monocytes, and overexpression of LINC00305 drives the production of pro‐inflammatory cytokines through activation of nuclear factor‐κB (NF-κB). Mechanistically, LINC00305 interacts with the lipocalin-1 interacting membrane receptor (LIMR) to enhance the association with the aryl-hydrocarbon receptor repressor (AHRR), promoting AHRR expression and nuclear localization that, in turn, facilitates NF-κB activation and downstream inflammatory gene expression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n In immune-mediated disorders, elevated LINC00305 levels have been observed in rheumatoid arthritis patients, where its expression correlates positively with disease activity indices and established inflammatory markers, suggesting a potential biomarker role in disease diagnosis and management."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " Conversely, alterations in LINC00305 expression have also been documented in multiple sclerosis, further underscoring its involvement in modulating immune responses."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n Moreover, nutritional interventions aimed at reducing inflammation—for instance, dietary supplementation with polyphenols and methylsulfonylmethane in endurance athletes—have been associated with increased levels of LINC00305 along with other inflammatory RNA biomarkers, suggesting that LINC00305 is responsive to systemic inflammatory cues and may serve as a marker of muscle recovery and injury in such contexts."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n Finally, in vascular endothelial cells, hypoxic stress up-regulates LINC00305, which functions as a molecular sponge for miR-136 and thereby promotes cell apoptosis. This finding indicates that LINC00305 contributes to endothelial dysfunction by modulating microRNA activity under stress conditions, providing further insight into its role in vascular pathophysiology."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n Collectively, these studies suggest that LINC00305 is a multifaceted regulator that promotes inflammatory responses through NF-κB signaling, influences vascular smooth muscle cell phenotype, and modulates endothelial cell survival, thereby positioning it as a potential biomarker and therapeutic target in a range of cardiovascular and immune-mediated diseases.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Dan-Dan Zhang, Wen-Tian Wang, Jian Xiong, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long noncoding RNA LINC00305 promotes inflammation by activating the AHRR-NF-κB pathway in human monocytes."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/srep46204"}], "href": "https://doi.org/10.1038/srep46204"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28393844"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28393844"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "A S Wahba, M E Ibrahim, N M Mesbah, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Serum LINC00305 expression and its genetic variant rs2850711 are associated with clinical and laboratory features of rheumatoid arthritis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Br J Biomed Sci (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1080/09674845.2020.1744942"}], "href": "https://doi.org/10.1080/09674845.2020.1744942"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32188348"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32188348"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Elizabeth A Tanner, Melody A Gary, Asheal A Davis, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Alterations in Systemic Inflammatory Response Following a Half-Marathon Race with a Combined Curcumin and Pomegranate Supplement: A Feasibility Study."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Diet Suppl (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1080/19390211.2020.1786206"}], "href": "https://doi.org/10.1080/19390211.2020.1786206"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32657201"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32657201"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Elizabeth A Tanner, Melody A Gary, Stephan Michalik, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Optimized Curcumin, Pomegranate Extract, and Methylsulfonylmethane Reduce Acute, Systemic Inflammatory Response to a Half-marathon Race."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Altern Ther Health Med (2022)"}]}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32619204"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32619204"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Bo-Ya Zhang, Zhe Jin, Zhuo Zhao "}, {"type": "b", "children": [{"type": "t", "text": "Long intergenic noncoding RNA 00305 sponges miR-136 to regulate the hypoxia induced apoptosis of vascular endothelial cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biomed Pharmacother (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.biopha.2017.07.099"}], "href": "https://doi.org/10.1016/j.biopha.2017.07.099"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28763747"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28763747"}]}]}]}
Synonyms NCRNA00305, C18ORF20, HST1235
Proteins CR020_HUMAN
NCBI Gene ID 221241
API
Download Associations
Predicted Functions View LINC00305's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC00305's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC00305's ARCHS4 Predicted Functions.

Functional Associations

LINC00305 has 659 functional associations with biological entities spanning 7 categories (molecular profile, organism, chemical, disease, phenotype or trait, functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 28 datasets.

Click the + buttons to view associations for LINC00305 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray tissue samples with high or low expression of LINC00305 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray dataset.
Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles tissues with high or low expression of LINC00305 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset.
BioGPS Human Cell Type and Tissue Gene Expression Profiles cell types and tissues with high or low expression of LINC00305 gene relative to other cell types and tissues from the BioGPS Human Cell Type and Tissue Gene Expression Profiles dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00305 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
CCLE Cell Line Gene Expression Profiles cell lines with high or low expression of LINC00305 gene relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset.
ChEA Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of LINC00305 gene from the CHEA Transcription Factor Binding Site Profiles dataset.
ChEA Transcription Factor Targets transcription factors binding the promoter of LINC00305 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00305 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
CTD Gene-Chemical Interactions chemicals interacting with LINC00305 gene/protein from the curated CTD Gene-Chemical Interactions dataset.
CTD Gene-Disease Associations diseases associated with LINC00305 gene/protein from the curated CTD Gene-Disease Associations dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at LINC00305 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of LINC00305 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of LINC00305 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GEO Signatures of Differentially Expressed Genes for Diseases disease perturbations changing expression of LINC00305 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of LINC00305 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Kinase Perturbations kinase perturbations changing expression of LINC00305 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of LINC00305 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GEO Signatures of Differentially Expressed Genes for Viral Infections virus perturbations changing expression of LINC00305 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of LINC00305 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GWASdb SNP-Disease Associations diseases associated with LINC00305 gene in GWAS and other genetic association datasets from the GWASdb SNP-Disease Associations dataset.
GWASdb SNP-Phenotype Associations phenotypes associated with LINC00305 gene in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of LINC00305 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00305 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
LOCATE Predicted Protein Localization Annotations cellular components predicted to contain LINC00305 protein from the LOCATE Predicted Protein Localization Annotations dataset.
MiRTarBase microRNA Targets microRNAs targeting LINC00305 gene in low- or high-throughput microRNA targeting studies from the MiRTarBase microRNA Targets dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of LINC00305 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
Pathway Commons Protein-Protein Interactions interacting proteins for LINC00305 from the Pathway Commons Protein-Protein Interactions dataset.
TCGA Signatures of Differentially Expressed Genes for Tumors tissue samples with high or low expression of LINC00305 gene relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.